RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CEP78Q5JTW2 689 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 CELF3Q5SZQ8 465 aaKnown RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 PDZK1Q5T2W1 519 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 STEAP1BQ6NZ63 245 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 GPR142Q7Z601 462 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 MOB3BQ86TA1 216 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ITIH5Q86UX2 942 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 CNGA4Q8IV77 575 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ODF3L1Q8IXM7 274 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ALLCQ8N6M5 410 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 NEXN-AS1Q8NBZ9 246 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SLC37A3Q8NCC5 494 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 OR7G2Q8NG99 324 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 OR4K14Q8NGD5 310 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 LKAAEAR1Q8TD35 194 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 LHX4Q969G2 390 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RTP4Q96DX8 246 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 C17orf77Q96MU5 243 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 TECTBQ96PL2 329 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 NEDD4LQ96PU5 975 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 TTYH2Q9BSA4 534 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 FEM1AQ9BSK4 669 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 WACQ9BTA9 647 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ST6GALNAC5Q9BVH7 336 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ILKAPQ9H0C8 392 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RHOJQ9H4E5 214 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 NARFLQ9H6Q4 476 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ALG9Q9H6U8 611 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 PARVGQ9HBI0 331 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 POT1Q9NUX5 634 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 PSMC3IPQ9P2W1 217 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 PITPNC1Q9UKF7 332 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RPAP1Q9BWH6 1393 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SMIM35A0A1B0GVV1 85 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 A0A1W2PPV4 95 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF840PA6NDX5 716 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 CD8B2A6NJW9 211 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SHISA7A6NL88 538 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 HAS3O00219 553 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 HIP1O00291 1037 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 IMPA2O14732 288 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 FPGTO14772 594 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 B4GAT1O43505 415 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SYNGR3O43761 229 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 KCNJ13O60928 360 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 CDK2AP2O75956 126 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 LRATO95237 230 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 BAG4O95429 457 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 NTN1O95631 604 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 TGM6O95932 706 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ERCC1P07992 297 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 H2BFMP0C1H6 154 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 PRKAR1AP10644 381 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 PRF1P14222 555 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ETS2P15036 469 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 AOC1P19801 751 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 PGCP20142 388 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 CCKBRP32239 447 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 FEN1P39748 380 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 RFX2P48378 723 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 PGFP49763 221 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 EFNB2P52799 333 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 GAS1P54826 345 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 OR1D5P58170 312 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 DCDC1P59894 354 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 YWHAEP62258 255 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 NTHL1P78549 312 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ASPHQ12797 758 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ATXN7L3Q14CW9 347 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 DUSP5Q16690 384 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 OTUD3Q5T2D3 398 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 AGAP7PQ5VUJ5 663 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 LIPNQ5VXI9 398 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 AWAT2Q6E213 333 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 RHBDD2Q6NTF9 364 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SCYL2Q6P3W7 929 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 TMEM220Q6QAJ8 160 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SCARA5Q6ZMJ2 495 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 GABRG1Q8N1C3 465 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 GVQW1Q8N7I0 195 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 TCEANCQ8N8B7 351 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 MFSD9Q8NBP5 474 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ICA1LQ8NDH6 482 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 DMBX1Q8NFW5 382 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 LRRC15Q8TF66 581 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF473Q8WTR7 871 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 MAIP1Q8WWC4 291 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 MRPL24Q96A35 216 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 TM4SF19Q96DZ7 209 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SCMH1Q96GD3 660 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ARL5BQ96KC2 179 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF578Q96N58 590 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 AGAP4Q96P64 663 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 LPAR4Q99677 370 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 DPH7Q9BTV6 452 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 CXXC4Q9H2H0 198 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ANKRA2Q9H9E1 313 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 ZBTB20Q9HC78 741 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms