RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 OR10A5Q9H207 317 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 KIF17Q9P2E2 1029 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 POFUT2Q9Y2G5 429 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 GPR55Q9Y2T6 319 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 TCRBV16S1A1N1A0A5B0 115 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 FAAHO00519 579 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 IFNA16P05015 189 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 TUBA4AP68366 448 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZNF155Q12901 538 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 PIN1Q13526 163 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZNHIT3Q15649 155 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 DCST1Q5T197 706 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 LAIR2Q6ISS4 152 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 COX15Q7KZN9 410 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 BPHLQ86WA6 291 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZNF786Q8N393 782 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 ZSCAN1Q8NBB4 408 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 RCBTB1Q8NDN9 531 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 TSPAN14Q8NG11 270 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 OR6C1Q96RD1 312 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 NIPSNAP1Q9BPW8 284 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 LRFN3Q9BTN0 628 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 YIPF2Q9BWQ6 316 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 RIBC2Q9H4K1 309 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 PAPOLBQ9NRJ5 636 aaKnown RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 MAN2C1Q9NTJ4 1040 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 KLHL28Q9NXS3 571 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
CLK3-204ENST00000483723 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 RARRES3Q9UL19 164 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
CLK3-204ENST00000483723 SH3PXD2BA1X283 911 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 PRR33A8MZF0 331 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 BCKDKO14874 412 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 SEC24DO94855 1032 aaPredicted RBP13.03□□□□□ -0.32
CLK3-204ENST00000483723 GASTP01350 101 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 CT45A8P0DMV1 189 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 CT45A9P0DMV2 189 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 NID1P14543 1247 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 IL7RP16871 459 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 EPHA2P29317 976 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 CD47Q08722 323 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLK3-204ENST00000483723 SEC23BQ15437 767 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 GPR68Q15743 365 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 CT45A2Q5DJT8 189 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 NPSR1Q6W5P4 371 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 LINC00471Q8N535 108 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 OR9Q2Q8NGE9 314 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 HDAC2Q92769 488 aaKnown RBP13.03□□□□□ -0.32
CLK3-204ENST00000483723 GFM1Q96RP9 751 aaKnown RBP13.03□□□□□ -0.32
CLK3-204ENST00000483723 FNDC11Q9BVV2 318 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 EVA1AQ9H8M9 152 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 SLC13A4Q9UKG4 626 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 DTX4Q9Y2E6 619 aa13.03□□□□□ -0.32
CLK3-204ENST00000483723 COL5A1P20908 1838 aaPredicted RBP13.03□□□□□ -0.32
CLK3-204ENST00000483723 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 SYNDIG1LA6NDD5 238 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 C17orf105B2RV13 164 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 UGT2B17O75795 530 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 CLPTM1O96005 669 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 IGKV1D-16P01601 117 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 IGKV3-11P04433 115 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 GP1BAP07359 652 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 FGF5P12034 268 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 TNNI3P19429 210 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 ACP1P24666 158 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 GRK6P43250 576 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 RPL5P46777 297 aaKnown RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 RPP38P78345 283 aaKnown RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 RAPSNQ13702 412 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 LIN52Q52LA3 116 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 EIPR1Q53HC9 387 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 C6orf141Q5SZD1 244 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 RNF220Q5VTB9 566 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 C1orf189Q5VU69 101 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 ZNF385CQ66K41 422 aaPredicted RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 FIGNL1Q6PIW4 674 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 ZC3H14Q6PJT7 736 aaKnown RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 ZAR1Q86SH2 424 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 TAGAPQ8N103 731 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms