RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 AP3S2P59780 193 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CXCR4P61073 352 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ZXDBP98169 803 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CDK3Q00526 305 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 REEP5Q00765 189 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ZNF33AQ06730 810 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 BST2Q10589 180 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 TSPAN31Q12999 210 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GRIK2Q13002 908 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SERTAD2Q14140 314 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TRAM2Q15035 370 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TAF13Q15543 124 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 EFNB3Q15768 340 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SYPL1Q16563 259 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 KNOP1Q1ED39 458 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 C5orf64Q2M2E5 130 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GOLGA7BQ2TAP0 167 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 KLHL38Q2WGJ6 581 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 MIDNQ504T8 468 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ALG10Q5BKT4 473 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ALG10BQ5I7T1 473 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 FAM69BQ5VUD6 431 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TIGD3Q6B0B8 471 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TMEM225Q6GV28 225 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SPOPLQ6IQ16 392 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PLEKHA7Q6IQ23 1121 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 C3P1Q6ZMU1 363 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 C19orf35Q6ZS72 473 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SSX9Q7RTT3 188 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PARGQ86W56 976 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC26A11Q86WA9 606 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ZFAND4Q86XD8 727 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC13A5Q86YT5 568 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 PRSS58Q8IYP2 241 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ZNF34Q8IZ26 560 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TMEM217Q8N7C4 229 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 LRRC75AQ8NAA5 344 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC44A5Q8NCS7 719 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CHDHQ8NE62 594 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 C19orf18Q8NEA5 215 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 OR51G2Q8NGK0 314 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 OR13C3Q8NGS6 347 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 OR52I2Q8NH67 350 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 OR6X1Q8NH79 312 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 FAM110BQ8TC76 370 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ADAMTS16Q8TE57 1224 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 FAR1Q8WVX9 515 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC44A1Q8WWI5 657 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 IGFBPL1Q8WX77 278 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PROX1Q92786 737 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GLYATL1Q969I3 302 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC38A4Q969I6 547 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 MOB3AQ96BX8 217 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 DGCR14Q96DF8 476 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 METTL2AQ96IZ6 378 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 PRMT6Q96LA8 375 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 C9orf72Q96LT7 481 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 HARBI1Q96MB7 349 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SFXN2Q96NB2 322 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TAAR1Q96RJ0 339 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 RANBP9Q96S59 729 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GFI1Q99684 422 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TRMT61BQ9BVS5 477 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 QTRT1Q9BXR0 403 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 DUSP16Q9BY84 665 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GSDMCQ9BYG8 508 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SLC38A1Q9H2H9 487 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 DPAGT1Q9H3H5 408 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 NXF3Q9H4D5 531 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 RANBP3Q9H6Z4 567 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 TRIM45Q9H8W5 580 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 VIPAS39Q9H9C1 493 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CD209Q9NNX6 404 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PRSS16Q9NQE7 514 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 DYRK4Q9NR20 520 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 POLE4Q9NR33 117 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 GPR173Q9NS66 373 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 RNF146Q9NTX7 359 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 STMN3Q9NZ72 180 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PTTG2Q9NZH5 202 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 LNPEPQ9UIQ6 1025 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 EMCNQ9ULC0 261 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 B3GALT5Q9Y2C3 310 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TBL2Q9Y4P3 447 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 TSSC4Q9Y5U2 329 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 NACADO15069 1562 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 TRBV5-7A0A0A0MS05 114 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 LRRN3E7EW58 273 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 AIM2O14862 343 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZBTB5O15062 677 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 INSIG1O15503 277 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ENTPD5O75356 428 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 LUC7L3O95232 432 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 CST4P01036 141 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 GP1BAP07359 652 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SP9P0CG40 484 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ATP1B2P14415 290 aaPredicted RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 EIF2S2P20042 333 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms