RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TMEM175Q9BSA9 504 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF665Q9H7R5 613 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PDGFCQ9NRA1 345 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 LHX3Q9UBR4 397 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ADAM28Q9UKQ2 775 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 NSG2Q9Y328 171 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CACNA1IQ9P0X4 2223 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ATP6AP2A0A1C7CYW4 349 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 C12orf71A8MTZ7 269 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PDLIM1O00151 329 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 DUX1O43812 170 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RHOBTB1O94844 696 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NPSP0C0P6 89 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 BDKRB2P30411 391 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CD80P33681 288 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CTTNQ14247 550 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 ICAM4Q14773 271 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CELF3Q5SZQ8 465 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 FRG2Q64ET8 278 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 Q6ZSR3 168 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CCDC80Q76M96 950 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 ASCL5Q7RTU5 278 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TRPM8Q7Z2W7 1104 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PEG10Q86TG7 708 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 CACUL1Q86Y37 369 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PAPD5Q8NDF8 572 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 OR4K1Q8NGD4 311 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CD300LFQ8TDQ1 290 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SEMA4DQ92854 862 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC25A36Q96CQ1 311 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 ZNF570Q96NI8 536 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 AMDHD1Q96NU7 426 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 DUX5Q96PT3 197 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 FUNDC2Q9BWH2 189 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 KLHL31Q9H511 634 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NOX4Q9NPH5 578 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 UFSP2Q9NUQ7 469 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 LRRK1Q38SD2 2015 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 E7ENQ6 273 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 IMPA2O14732 288 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 LUC7L3O95232 432 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 TNNI3P19429 210 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 IDSP22304 550 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 MAT2AP31153 395 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 UGT1A5P35504 534 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 GPR12P47775 334 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CCT3P49368 545 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 MMP15P51511 669 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NXPH1P58417 271 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RAB11AP62491 216 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 FGL1Q08830 312 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PMPCAQ10713 525 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 C1orf61Q13536 156 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RAB11BQ15907 218 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 KIF19Q2TAC6 998 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TMEM65Q6PI78 240 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC25A47Q6Q0C1 308 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 MBOAT1Q6ZNC8 495 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CLEC4FQ8N1N0 589 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 COMMD1Q8N668 190 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC5A8Q8N695 610 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 ARFGAP2Q8N6H7 521 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TEX45Q8NA69 505 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CLHC1Q8NHS4 586 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SPATA22Q8NHS9 363 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RNF128Q8TEB7 428 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PHF21AQ96BD5 680 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NTNG2Q96CW9 530 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CCT8L2Q96SF2 557 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 API5Q9BZZ5 524 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 DNTTIP1Q9H147 329 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RIMS4Q9H426 269 aaPredicted RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 DPEP2Q9H4A9 486 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 GPN2Q9H9Y4 310 aaPredicted RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 CHST11Q9NPF2 352 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PNRC2Q9NPJ4 139 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 FAM207AQ9NSI2 230 aaPredicted RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 SLC7A8Q9UHI5 535 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 SIX4Q9UIU6 781 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 LAMP3Q9UQV4 416 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 GSTK1Q9Y2Q3 226 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TENM4Q6N022 2769 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 A0A0C4DFX4 3053 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TRAV18A0A075B6X5 111 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 DPPA5A6NC42 116 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 PSMD11O00231 422 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TRAFD1O14545 582 aaPredicted RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 SYT7O43581 403 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 RANBP6O60518 1105 aaKnown RBP2.97□□□□□ -1.93
SMC6-208ENST00000481708 TSPAN1O60635 241 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NDUFA7O95182 113 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 TSPAN13O95857 204 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 LDLRP01130 860 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 ALPIP09923 528 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 CEBPBP17676 345 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 NPY2RP49146 381 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 KRT81Q14533 505 aa2.97□□□□□ -1.93
SMC6-208ENST00000481708 KYAT1Q16773 422 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms