RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 REM1O75628 298 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 GLSO94925 669 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 NKX2-2O95096 273 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 TGDSO95455 350 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 P04436 131 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 HMGN2P05204 90 aaKnown RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CYP4B1P13584 511 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 IDO1P14902 403 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ZNF24P17028 368 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 S100A3P33764 101 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 GABRA3P34903 492 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CASP3P42574 277 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CCT3P49368 545 aaKnown RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 MAN2A2P49641 1150 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CLNS1AP54105 237 aaKnown RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 GYS2P54840 703 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CASP9P55211 416 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 NRG3P56975 720 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ALDH6A1Q02252 535 aaKnown RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 GSTA3Q16772 222 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CMPK2Q5EBM0 449 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CCNJQ5T5M9 372 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 FNDC7Q5VTL7 733 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 SLC22A10Q63ZE4 541 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ACAD11Q709F0 780 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 OLIG3Q7RTU3 272 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 FUNDC1Q8IVP5 155 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ARFGAP2Q8N6H7 521 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 SLC16A11Q8NCK7 471 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 DIO2Q92813 273 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CDS1Q92903 461 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 RMND5BQ96G75 393 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 SLC35A4Q96G79 324 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ADOQ96SZ5 270 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 PRPF18Q99633 342 aaKnown RBP9.69□□□□□ -0.86
SSBP1-210ENST00000481508 FAM173AQ9BQD7 235 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CCDC28BQ9BUN5 200 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 ZNF385DQ9H6B1 395 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CCDC134Q9H6E4 229 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 GALNT9Q9HCQ5 603 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 SERHLQ9NQF3 203 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 CBLCQ9ULV8 474 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 TACC2O95359 2948 aa9.69□□□□□ -0.86
SSBP1-210ENST00000481508 RNF103-CHMP3A0A140T963 221 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ANKUB1A6NFN9 424 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 KLRC4-KLRK1H3BQV0 150 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 DYNC1I1O14576 645 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ICOSLGO75144 302 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 TRIM3O75382 744 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SLC22A3O75751 556 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 CRYABP02511 175 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 PGRP06401 933 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 EDN3P14138 238 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 NAGAP17050 411 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 MDH1P40925 334 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 RFX3P48380 749 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 MRPL19P49406 292 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 PPIAP62937 165 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 MRPS22P82650 360 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 TP53BP2Q13625 1128 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 EIF2S3LQ2VIR3 472 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SPDYE7PQ495Y7 208 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 GTDC1Q4AE62 458 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 TIGD2Q4W5G0 525 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 FIGNL1Q6PIW4 674 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 DNAJC14Q6Y2X3 702 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 DND1Q8IYX4 353 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 TMEM251Q8N6I4 163 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 NATD1Q8N6N6 113 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 FAM98AQ8NCA5 519 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 OR5D16Q8NGK9 328 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 DNAJB8Q8NHS0 232 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SFXN5Q8TD22 340 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 GPR151Q8TDV0 419 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 RNF138Q8WVD3 245 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SLC9A6Q92581 669 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 VPS33AQ96AX1 596 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 GPR137Q96N19 417 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 RILPQ96NA2 401 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 CCDC115Q96NT0 180 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 COL21A1Q96P44 957 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ZNF317Q96PQ6 595 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 TMEM120AQ9BXJ8 343 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ANGPTL4Q9BY76 406 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 DEFB127Q9H1M4 99 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 IL1RL2Q9HB29 575 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 C3orf14Q9HBI5 128 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SLC52A3Q9NQ40 469 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 AGPAT4Q9NRZ5 378 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 ZIM2Q9NZV7 527 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 VPS4AQ9UN37 437 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 OR10H1Q9Y4A9 318 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.68□□□□□ -0.86
SSBP1-210ENST00000481508 POLEQ07864 2286 aa9.68□□□□□ -0.86
SSBP1-210ENST00000481508 KIAA1549Q9HCM3 1950 aa9.67□□□□□ -0.86
SSBP1-210ENST00000481508 A0A0G2JND7 137 aa9.67□□□□□ -0.86
SSBP1-210ENST00000481508 PRSS51A0A1B0GVH4 220 aa9.67□□□□□ -0.86
SSBP1-210ENST00000481508 PRAMEF25A6NGN4 478 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms