RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ANKRA2Q9H9E1 313 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 SDHAF3Q9NRP4 125 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CDC42EP3Q9UKI2 254 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CLEC4AQ9UMR7 237 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 GPR52Q9Y2T5 361 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 TNPO3Q9Y5L0 923 aaKnown RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 AP4B1Q9Y6B7 739 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 TCRBV9S1A1TA0A576 114 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 FAM159BA6NKW6 160 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 SCO2O43819 266 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 NME6O75414 186 aaPredicted RBP15.38■□□□□ 0.05
VIM-204ENST00000478746 DANCRP0C864 163 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 ALDH9A1P49189 494 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 PSPHP78330 225 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 CTU2Q2VPK5 515 aaKnown RBP15.38■□□□□ 0.05
VIM-204ENST00000478746 KRTAP24-1Q3LI83 254 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 FRG2Q64ET8 278 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 GMPPAQ96IJ6 420 aaPredicted RBP15.38■□□□□ 0.05
VIM-204ENST00000478746 FRG2BQ96QU4 278 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 NTMT1Q9BV86 223 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 NOL11Q9H8H0 719 aaKnown RBP15.38■□□□□ 0.05
VIM-204ENST00000478746 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 PFDN4Q9NQP4 134 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 WHRNQ9P202 907 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 RNF115Q9Y4L5 304 aa15.38■□□□□ 0.05
VIM-204ENST00000478746 OR7A17O14581 309 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 CLOCKO15516 846 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 SIX3O95343 332 aaPredicted RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 IGHV4-39P01824 125 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 TCP1P17987 556 aaKnown RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 EVI2BP34910 448 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 SLC6A8P48029 635 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 FAPQ12884 760 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 IFT88Q13099 833 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 FAM83EQ2M2I3 478 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 ERCC6LQ2NKX8 1250 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 GLYR1Q49A26 553 aaPredicted RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 NPSR1Q6W5P4 371 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 DNM1P46Q6ZS02 220 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 COMMD6Q7Z4G1 85 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 STK32CQ86UX6 486 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 SLC44A2Q8IWA5 706 aaPredicted RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 CCDC116Q8IYX3 515 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 UHMK1Q8TAS1 419 aaKnown RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 KCTD4Q8WVF5 259 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 KAT2AQ92830 837 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 VSTM2LQ96N03 204 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 FAIM2Q9BWQ8 316 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 BEX2Q9BXY8 128 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 STOML1Q9UBI4 398 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 OR10H1Q9Y4A9 318 aa15.37■□□□□ 0.05
VIM-204ENST00000478746 MAGED1Q9Y5V3 778 aaPredicted RBP15.37■□□□□ 0.05
VIM-204ENST00000478746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.36■□□□□ 0.05
VIM-204ENST00000478746 A0A1W2PP18 115 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 CCDC189A1A4V9 331 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 GPRIN2O60269 458 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 NDUFS7O75251 213 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 CD3EP07766 207 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 PSMB1P20618 241 aaKnown RBP15.36■□□□□ 0.05
VIM-204ENST00000478746 EIF1AXP47813 144 aaKnown RBP15.36■□□□□ 0.05
VIM-204ENST00000478746 CCNG1P51959 295 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 STX5Q13190 355 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 ZNF628Q5EBL2 1059 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 SGO1Q5FBB7 561 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 METTL2BQ6P1Q9 378 aaKnown RBP15.36■□□□□ 0.05
VIM-204ENST00000478746 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 STEAP2Q8NFT2 490 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 OR4N2Q8NGD1 307 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 OR52B6Q8NGF0 335 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 ZNF675Q8TD23 568 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 DUSP19Q8WTR2 217 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 ERP27Q96DN0 273 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 C1GALT1C1Q96EU7 318 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 HS6ST2Q96MM7 605 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 KCNK17Q96T54 332 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 RHNO1Q9BSD3 238 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 FOLH1BQ9HBA9 442 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 BARX1Q9HBU1 254 aaPredicted RBP15.36■□□□□ 0.05
VIM-204ENST00000478746 ZBTB26Q9HCK0 441 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
VIM-204ENST00000478746 UTS2RQ9UKP6 389 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 SLC12A4Q9UP95 1085 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 SNX24Q9Y343 169 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 ALPK2Q86TB3 2170 aa15.36■□□□□ 0.05
VIM-204ENST00000478746 EIF1AYO14602 144 aaKnown RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 FADS1O60427 444 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 SS18L1O75177 396 aaPredicted RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 FESP07332 822 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 THBS1P07996 1170 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 ACAP2Q15057 778 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.35■□□□□ 0.05
VIM-204ENST00000478746 ZNF672Q499Z4 452 aaPredicted RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 NCMAPQ5T1S8 102 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 C6orf52Q5T4I8 152 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 CENPLQ8N0S6 344 aaPredicted RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 NEUROG1Q92886 237 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 HDHD5Q9BXW7 423 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 KCNF1Q9H3M0 494 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms