RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PRR22Q8IZ63 422 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ADAMTS16Q8TE57 1224 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 S100A16Q96FQ6 103 aaKnown RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 HOXD1Q9GZZ0 328 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 LDAHQ9H6V9 325 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 USP36Q9P275 1121 aaKnown RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 EXTL2Q9UBQ6 330 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 VSTM2BA6NLU5 285 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ARMC10Q8N2F6 343 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 OR8H1Q8NGG4 311 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 SLC22A8Q8TCC7 542 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 MS4A8Q9BY19 250 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ASB6Q9NWX5 421 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 TAS2R10Q9NYW0 307 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 RP1P56715 2156 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ACOT8O14734 319 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CSTBP04080 98 aaKnown RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CCNOP22674 350 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 KEAP1Q14145 624 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 GK3PQ14409 553 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 BCL7AQ4VC05 210 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF619Q8N2I2 560 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 C15orf40Q8WUR7 153 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CD8B2A6NJW9 211 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 HCKP08631 526 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CD8BP10966 210 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 GADD45AP24522 165 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 C4orf46Q504U0 113 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 WDR20Q8TBZ3 569 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM239Q8WW34 195 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 SLC5A10A0PJK1 596 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 NDUFB2O95178 105 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 FURINP09958 794 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PEPDP12955 493 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 CPMP14384 443 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 HSF2Q03933 536 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 TDGQ13569 410 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 APOFQ13790 326 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ERV3-1Q14264 604 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 CCSAPQ6IQ19 270 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF227Q86WZ6 799 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 NUDT8Q8WV74 236 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 THRSPQ92748 146 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 MSLNLQ96KJ4 702 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 OR7D2Q96RA2 312 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ADOQ96SZ5 270 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 B3GAT2Q9NPZ5 323 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ADAM29Q9UKF5 820 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 COL5A3P25940 1745 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 C12orf71A8MTZ7 269 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 WRBO00258 174 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PCDH17O14917 1159 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 EMP2P54851 167 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 MAZP56270 477 aaKnown RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 CLRN1P58418 232 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 LSAMPQ13449 338 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 SGCAQ16586 387 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 DUSP6Q16828 381 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF283Q8N7M2 679 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 NAXEQ8NCW5 288 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PAPD5Q8NDF8 572 aaKnown RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 OR52R1Q8NGF1 315 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 OR2T4Q8NH00 348 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 FUZQ9BT04 418 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 MBNL1Q9NR56 388 aaKnown RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 AP1M2Q9Y6Q5 423 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 A6NHS1 94 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 GGT2P36268 569 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 EIF2DP41214 584 aaKnown RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 CHRNEQ04844 493 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 DCST2Q5T1A1 773 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ALG1LQ6GMV1 187 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 MAMDC2Q7Z304 686 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 ACOT11Q8WXI4 607 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-208ENST00000478423 FKBP10Q96AY3 582 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PCDHGB6Q9Y5F9 930 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 AHCTF1Q8WYP5 2266 aa13.38□□□□□ -0.27
NPHP4-208ENST00000478423 PGAM2P15259 253 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 RPS15P62841 145 aaKnown RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SEC23BQ15437 767 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 CDKN3Q16667 212 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 XKR7Q5GH72 579 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms