RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PCYT1AP49585 367 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SH2D4BQ5SQS7 431 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 NPSR1Q6W5P4 371 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 FRMD7Q6ZUT3 714 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 LUZP2Q86TE4 346 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SMPDL3BQ92485 455 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 C11orf24Q96F05 449 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 FAM120CQ9NX05 1096 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 GALNT8Q9NY28 637 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 TBK1Q9UHD2 729 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 FBXL2Q9UKC9 423 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 MTORP42345 2549 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 SH3D21A4FU49 640 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 MSTNO14793 375 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 HCRTR2O43614 444 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 UROSP10746 265 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 KLK2P20151 261 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 SOX18P35713 384 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 CPOXP36551 454 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 CLDN18P56856 261 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 DNAJB13P59910 316 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 RPS3AP61247 264 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 TMEM107Q6UX40 140 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 TRIM46Q7Z4K8 759 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 GCNT2Q8N0V5 402 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 OR2L13Q8N349 312 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 EIF1ADQ8N9N8 165 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 GFM2Q969S9 779 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 SLC39A3Q9BRY0 314 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 ZNF226Q9NYT6 803 aa13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-209ENST00000478349 A0A1W2PNV4 684 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 SLC28A1O00337 649 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 PDPK1O15530 556 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 RGS14O43566 566 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 FOSL1P15407 271 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 HK1P19367 917 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 GPC1P35052 558 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 SLCO1A2P46721 670 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 STARP49675 285 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 PSG6Q00889 435 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 OCRLQ01968 901 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 GLYR1Q49A26 553 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM71E1Q6IPT2 247 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 NOXRED1Q6NXP6 359 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 UBQLNLQ8IYU4 475 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 LINC01560Q8TB33 94 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF764Q96H86 408 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 AMDHD1Q96NU7 426 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 TRMOQ9BU70 441 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 NEUROD4Q9HD90 331 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 FANCFQ9NPI8 374 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF175Q9Y473 711 aa13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 POLR3HQ9Y535 204 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-209ENST00000478349 COPEO14579 308 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 SEC22BO75396 215 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 TNFRSF21O75509 655 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 SMNDC1O75940 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 IL33O95760 270 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 PROCP04070 461 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 CPA3P15088 417 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 C17orf67Q0P5P2 114 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 FOXF2Q12947 444 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 STX5Q13190 355 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 KRTAP21-3Q3LHN1 58 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 CNEP1R1Q8N9A8 125 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 FADS6Q8N9I5 356 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 CEP70Q8NHQ1 597 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 ZBED6CLQ96FA7 236 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 CCT7Q99832 543 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 LMF2Q9BU23 707 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 DSN1Q9H410 356 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 BEX4Q9NWD9 120 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 C1orf109Q9NX04 203 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 TMED5Q9Y3A6 229 aa13.07□□□□□ -0.32
SMARCE1-209ENST00000478349 A8MXE2 369 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 G3V2L1 256 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 UPK1AO00322 258 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 ZIC3O60481 467 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 PLIN3O60664 434 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 ATE1O95260 518 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 PSMG1O95456 288 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 PRPS2P11908 318 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms