RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 OTCP00480 354 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 PDYNP01213 254 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ALDOAP04075 364 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 EVI2BP34910 448 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 PLTPP55058 493 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ATP5J2P56134 94 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 RPS3AP61247 264 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 CAPRIN1Q14444 709 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 PON3Q15166 354 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 GLYR1Q49A26 553 aaPredicted RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 RAET1LQ5VY80 246 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 HEPHL1Q6MZM0 1159 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 FAM180BQ6P0A1 224 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 NPSR1Q6W5P4 371 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ZNF704Q6ZNC4 412 aaPredicted RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 CCDC25Q86WR0 208 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 SLC44A2Q8IWA5 706 aaPredicted RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 METTL25Q8N6Q8 603 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ZNF611Q8N823 705 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 OR2M3Q8NG83 312 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 FBXO25Q8TCJ0 367 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 KAT2AQ92830 837 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 GFM2Q969S9 779 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 EFHD2Q96C19 240 aaPredicted RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 NSUN5Q96P11 429 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 SHCBP1LQ9BZQ2 653 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 KLHL4Q9C0H6 718 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 VPS11Q9H270 941 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 PTGES2Q9H7Z7 377 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 FOLH1BQ9HBA9 442 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 FANCFQ9NPI8 374 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 PFDN4Q9NQP4 134 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 FARSBQ9NSD9 589 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 TAS2R9Q9NYW1 312 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 VPS29Q9UBQ0 182 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 MCM8Q9UJA3 840 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ABCG2Q9UNQ0 655 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 UTP11Q9Y3A2 253 aaKnown RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 OR10H1Q9Y4A9 318 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 AP4B1Q9Y6B7 739 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ANK3Q12955 4377 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 H0YC42 278 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 HS3ST1O14792 307 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 SEC14L5O43304 696 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 SCO2O43819 266 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 FADS1O60427 444 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 THBDP07204 575 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 RPS17P08708 135 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 HSD3B1P14060 373 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 IL11P20809 199 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 HSD3B2P26439 372 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 TPD52P55327 224 aaPredicted RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 KRTAP1-1Q07627 177 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 TNK1Q13470 666 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 ETFDHQ16134 617 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 SGCBQ16585 318 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 CYP27C1Q4G0S4 372 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 STAC2Q6ZMT1 411 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 PLD6Q8N2A8 252 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 C1orf52Q8N6N3 182 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 SPATA4Q8NEY3 305 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 OR4N2Q8NGD1 307 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 OR9A2Q8NGT5 310 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 UHMK1Q8TAS1 419 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 NANOS1Q8WY41 292 aaKnown RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 MTBPQ96DY7 904 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 C1GALT1C1Q96EU7 318 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 GMPPAQ96IJ6 420 aaPredicted RBP8.67□□□□□ -1.02
CCM2-210ENST00000478169 TMEM204Q9BSN7 226 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 C1QTNF3Q9BXJ4 246 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 RAB17Q9H0T7 212 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 OR10A4Q9H209 315 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 ANKRA2Q9H9E1 313 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 GIMAP4Q9NUV9 329 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 MED11Q9P086 117 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 STOML1Q9UBI4 398 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 NFU1Q9UMS0 254 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 EMC9Q9Y3B6 208 aa8.67□□□□□ -1.02
CCM2-210ENST00000478169 ALPK2Q86TB3 2170 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 YLPM1P49750 1951 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 UQCRHLA0A096LP55 91 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 C17orf51A8MQB3 221 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 H3BML4 177 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 COQ9O75208 318 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 NME6O75414 186 aaPredicted RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 AQP8O94778 261 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 SLITRK5O94991 958 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 IL3P08700 152 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 COL6A2P12110 1019 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 MPIP34949 423 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 MAGEA12P43365 314 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 CLK3P49761 638 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 CLDN20P56880 219 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 PSG6Q00889 435 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 DMTNQ08495 405 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 CSTF3Q12996 717 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms