RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CLEC4AQ9UMR7 237 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 ACOT9Q9Y305 439 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 AP4B1Q9Y6B7 739 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 BCAS2O75934 225 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 CD3EP07766 207 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 ALDH18A1P54886 795 aaKnown RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 FAPQ12884 760 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 SGCBQ16585 318 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 PFKFB4Q16877 469 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 CTU2Q2VPK5 515 aaKnown RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 TMEM249Q2WGJ8 235 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 ZNF672Q499Z4 452 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 ZNF628Q5EBL2 1059 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 NCMAPQ5T1S8 102 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 DNAJC14Q6Y2X3 702 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 RAPH1Q70E73 1250 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 COMMD6Q7Z4G1 85 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 METTL4Q8N3J2 472 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 RHEBL1Q8TAI7 183 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 NEUROG1Q92886 237 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 S100PBPQ96BU1 408 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 EFHD2Q96C19 240 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 NTMT1Q9BV86 223 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 BEX2Q9BXY8 128 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 ANKRA2Q9H9E1 313 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 AHSPQ9NZD4 102 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 GDF2Q9UK05 429 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 PSME2Q9UL46 239 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 PPP2R2CQ9Y2T4 447 aa18.1■□□□□ 0.49
PDLIM1-202ENST00000477757 IGHV4-30-2A0A087WSY4 118 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 FAM159BA6NKW6 160 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 CLDN9O95484 217 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 GFAPP14136 432 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 SSTR1P30872 391 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 PGGHGQ32M88 737 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 GLYR1Q49A26 553 aaPredicted RBP18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 FRG2Q64ET8 278 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 FAM180BQ6P0A1 224 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 STK32CQ86UX6 486 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 STEAP2Q8NFT2 490 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 C1GALT1C1Q96EU7 318 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 FRG2BQ96QU4 278 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 RHNO1Q9BSD3 238 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 TRAF4Q9BUZ4 470 aaPredicted RBP18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 PRRG4Q9BZD6 226 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 ESRP2Q9H6T0 727 aaKnown RBP18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 PTGES2Q9H7Z7 377 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 MED11Q9P086 117 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 ABCG2Q9UNQ0 655 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 ZNF780BQ9Y6R6 833 aa18.09■□□□□ 0.49
PDLIM1-202ENST00000477757 TCRBV9S1A1TA0A576 114 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 FADS1O60427 444 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 NME6O75414 186 aaPredicted RBP18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 CRABP2P29373 138 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 SPRP35270 261 aaPredicted RBP18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 VLDLRP98155 873 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 DR1Q01658 176 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 STX5Q13190 355 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 TMEM44Q2T9K0 475 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 ALKBH2Q6NS38 261 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 PPP4R4Q6NUP7 873 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 NXNL1Q96CM4 212 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 CDK15Q96Q40 435 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 KCNK17Q96T54 332 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 GRIP2Q9C0E4 1043 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 SVEP1Q4LDE5 3571 aa18.08■□□□□ 0.48
PDLIM1-202ENST00000477757 CCDC189A1A4V9 331 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 WIPF1O43516 503 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 EIF1AXP47813 144 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 CASP9P55211 416 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 GALNT1Q10472 559 aaPredicted RBP18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 NRF1Q16656 503 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 ERCC6LQ2NKX8 1250 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 DTX2Q86UW9 622 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 SLC44A2Q8IWA5 706 aaPredicted RBP18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 CENPLQ8N0S6 344 aaPredicted RBP18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 KBTBD8Q8NFY9 601 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 OR4N2Q8NGD1 307 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 OR52B6Q8NGF0 335 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 PYROXD1Q8WU10 500 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 TM4SF18Q96CE8 201 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 TNFRSF13CQ96RJ3 184 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 ALG2Q9H553 416 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 FOLH1BQ9HBA9 442 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 NGBQ9NPG2 151 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 SDHAF3Q9NRP4 125 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 GLRX2Q9NS18 164 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 SNX12Q9UMY4 172 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 TNPO3Q9Y5L0 923 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 SNX8Q9Y5X2 465 aa18.07■□□□□ 0.48
PDLIM1-202ENST00000477757 MEGF8Q7Z7M0 2845 aa18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 OR7A17O14581 309 aa18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 EIF1AYO14602 144 aaKnown RBP18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 SIX3O95343 332 aaPredicted RBP18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 CD8AP01732 235 aa18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 ARL1P40616 181 aaPredicted RBP18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 CYS1Q717R9 158 aa18.06■□□□□ 0.48
PDLIM1-202ENST00000477757 OR10H5Q8NGA6 315 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms