RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LRIG1Q96JA1 1093 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SPSB2Q99619 263 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ATXN3LQ9H3M9 355 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 RHOJQ9H4E5 214 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 B3GAT2Q9NPZ5 323 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 TAS2R3Q9NYW6 316 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 NEMP2A6NFY4 417 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SC5DO75845 299 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CBSLP0DN79 551 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CTSAP10619 480 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 IRF1P10914 325 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CXCL2P19875 107 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 HLA-DPA1P20036 260 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 POU3F2P20265 443 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 C5AR1P21730 350 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CBSP35520 551 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 PMELP40967 661 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 ST3GAL4Q11206 333 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 POU4F2Q12837 409 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 BIKQ13323 160 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 GRIN2CQ14957 1233 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 DHCR24Q15392 516 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 MED22Q15528 200 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 MSANTD1Q6ZTZ1 278 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SPATA19Q7Z5L4 167 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 RABEPKQ7Z6M1 372 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 PHYKPLQ8IUZ5 450 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF383Q8NA42 475 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 AUTS2Q8WXX7 1259 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CNOT9Q92600 299 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 TADA1Q96BN2 335 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 MYEOVQ96EZ4 313 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SEMA3CQ99985 751 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SPON2Q9BUD6 331 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 GABARAPL3Q9BY60 117 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 OR51V1Q9H2C8 321 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 DPAGT1Q9H3H5 408 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SEMA6CQ9H3T2 930 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 SEMA3GQ9NS98 782 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 CNOT2Q9NZN8 540 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 DHCR7Q9UBM7 475 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF490Q9ULM2 529 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
RTFDC1-207ENST00000477573 C2orf78A6NCI8 922 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 URADA6NGE7 173 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 BLOC1S5-TXNDC5H3BN57 136 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 H7C1Q1 480 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 KDELR3O43731 214 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 ATP6AP2O75787 350 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 KLKB1P03952 638 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 MMP2P08253 660 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PAX1P15863 534 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 FPR1P21462 350 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CRYBB2P43320 205 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CSNK1EP49674 416 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 RPS24P62847 133 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PPIGQ13427 754 aaKnown RBP eCLIP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 SGO1Q5FBB7 561 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CNIH2Q6PI25 160 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 SCIMPQ6UWF3 145 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF783Q6ZMS7 281 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TRAM1L1Q8N609 369 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 DENND6BQ8NEG7 585 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 ARRDC2Q8TBH0 407 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CHFRQ96EP1 664 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TREX1Q9NSU2 369 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 A0A0D9SEW6 157 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 LOC285095A0A1B0GVY8 99 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TMEM218A2RU14 115 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 C5orf58C9J3I9 102 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 MCRIP1C9JLW8 97 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 H3BNC9 293 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 IMPA2O14732 288 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 SIX6O95475 246 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 OTCP00480 354 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 LRG1P02750 347 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 F11P03951 625 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 FGF1P05230 155 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 AGAP20933 346 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CHRNA4P43681 627 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 EVX1P49640 407 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CRISP3P54108 245 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CARD18P57730 90 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 SMAD3P84022 425 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 IL18Q14116 193 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PEA15Q15121 130 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms