RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 IER5LQ5T953 404 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 TECPR1Q7Z6L1 1165 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 HORMAD2Q8N7B1 307 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 PDXPQ96GD0 296 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ART5Q96L15 291 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 GPA33Q99795 319 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ADAM2Q99965 735 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 CTPS2Q9NRF8 586 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 HPF1Q9NWY4 346 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ZNF98A6NK75 572 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 A8MXK9 166 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 RFXAPO00287 272 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 INPPL1O15357 1258 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 FZD7O75084 574 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ADAMTS4O75173 837 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 OAZ2O95190 189 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 TFP02787 698 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 LPLP06858 475 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 NMBP08949 121 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 POU3F2P20265 443 aaPredicted RBP12.63□□□□□ -0.39
DFFB-209ENST00000477548 EFNB1P98172 346 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ZNF155Q12901 538 aaPredicted RBP12.63□□□□□ -0.39
DFFB-209ENST00000477548 DUSP4Q13115 394 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 MRPL58Q14197 206 aaKnown RBP12.63□□□□□ -0.39
DFFB-209ENST00000477548 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 CLEC12AQ5QGZ9 265 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 HECTD3Q5T447 861 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 RETSATQ6NUM9 610 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 KIAA1211LQ6NV74 962 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 SLC27A4Q6P1M0 643 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 PRICKLE2Q7Z3G6 844 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 OR56B4Q8NH76 319 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
DFFB-209ENST00000477548 FGF11Q92914 225 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 ZNF354BQ96LW1 612 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 BTBD1Q9H0C5 482 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 SLC6A17Q9H1V8 727 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 BRD9Q9H8M2 597 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 EDARQ9UNE0 448 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
DFFB-209ENST00000477548 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
DFFB-209ENST00000477548 M0R3H8 397 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 SLC16A5O15375 505 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 APOC3P02656 99 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 IRF1P10914 325 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 RPL3P39023 403 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 AP1S1P61966 158 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 IKBIPQ70UQ0 350 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 SORBS1Q9BX66 1292 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 ACTR6Q9GZN1 396 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 MIEF1Q9NQG6 463 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 FBXL2Q9UKC9 423 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 Q9Y3F1 56 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 PRR23D1E9PI22 279 aaPredicted RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 LDOC1O95751 146 aaPredicted RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 CH25HO95992 272 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 PRR23D2P0DMB1 279 aaPredicted RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 UGT2B7P16662 529 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 UQCRC2P22695 453 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 SHC1P29353 583 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 CORO1AP31146 461 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 OR10A3P58181 314 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 DGCR2P98153 550 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 TSTA3Q13630 321 aaPredicted RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 ETFDHQ16134 617 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 AGTRAPQ6RW13 159 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 SERPINA13PQ6UXR4 307 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 C16orf78Q8WTQ4 265 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 NPAS1Q99742 590 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
DFFB-209ENST00000477548 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 PRKAB1Q9Y478 270 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 NPTNQ9Y639 398 aa12.62□□□□□ -0.39
DFFB-209ENST00000477548 ARHGEF33A8MVX0 844 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 TGFB1P01137 390 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 URODP06132 367 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
DFFB-209ENST00000477548 ZNF3P17036 446 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 CXCL2P19875 107 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 RPL35P42766 123 aaKnown RBP12.61□□□□□ -0.39
DFFB-209ENST00000477548 CSNK1DP48730 415 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 RAG2P55895 527 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 MAP4K2Q12851 820 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 VASNQ6EMK4 673 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 CD300LDQ6UXZ3 194 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 CHST9Q7L1S5 443 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
DFFB-209ENST00000477548 RFKQ969G6 155 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms