RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NCF4Q15080 339 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 DECR1Q16698 335 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZSWIM7Q19AV6 140 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 LRRC36Q1X8D7 754 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SFT2D3Q587I9 215 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF311Q5JNZ3 666 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 FAAH2Q6GMR7 532 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 MRPL14Q6P1L8 145 aaKnown RBP11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZBTB49Q6ZSB9 765 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SHISA6Q6ZSJ9 500 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ANKRD37Q7Z713 158 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 VTCN1Q7Z7D3 282 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 LAPTM4BQ86VI4 370 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZDHHC13Q8IUH4 622 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SHISA5Q8N114 240 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 LILRA2Q8N149 483 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF619Q8N2I2 560 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SVOPLQ8N434 492 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 PACRGLQ8N7B6 248 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF615Q8N8J6 731 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SMYD1Q8NB12 490 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 GALNT6Q8NCL4 622 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 C16orf52Q8NHV5 167 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF354BQ96LW1 612 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 VSTM2LQ96N03 204 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SDF2Q99470 211 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 LPAR4Q99677 370 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 B3GNT4Q9C0J1 378 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 EVA1AQ9H8M9 152 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 REEP1Q9H902 201 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 CNOT11Q9UKZ1 510 aaKnown RBP11.36□□□□□ -0.59
MRPL55-227ENST00000475832 SH3GLB1Q9Y371 365 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 B3GALT1Q9Y5Z6 326 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 KCNE3Q9Y6H6 103 aa11.36□□□□□ -0.59
MRPL55-227ENST00000475832 COL27A1Q8IZC6 1860 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-227ENST00000475832 CROCCQ5TZA2 2017 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 C2orf92A0A1B0GVN3 265 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 FAM149AA5PLN7 773 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 J3QKU1 62 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 hCG_2039718K7EN88 272 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 SYT5O00445 386 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 ADAMDEC1O15204 470 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 MT-ND1P03886 318 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 FESP07332 822 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 THBS1P07996 1170 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 IL7RP16871 459 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 DRD5P21918 477 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PRKAR1BP31321 381 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PPICP45877 212 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 CLDN6P56747 220 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 SLC37A1P57057 533 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 SMIM11AP58511 58 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 RPS15P62841 145 aaKnown RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 KCNJ10P78508 379 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 CHRNEQ04844 493 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 TARDBPQ13148 414 aaKnown RBP eCLIP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 GK3PQ14409 553 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 LIN52Q52LA3 116 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 C3orf38Q5JPI3 329 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 EXOSC6Q5RKV6 272 aaKnown RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OR2T5Q6IEZ7 315 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 IZUMO2Q6UXV1 221 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 CPEB2Q7Z5Q1 589 aaKnown RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 WDR53Q7Z5U6 358 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 MARCH9Q86YJ5 346 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 HIPK1Q86Z02 1210 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 ESX1Q8N693 406 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OR10Q1Q8NGQ4 319 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OR2T29Q8NH02 315 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OR52P1PQ8NH57 321 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 NRG4Q8WWG1 115 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OIT3Q8WWZ8 545 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 DNAJC9Q8WXX5 260 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PIK3R3Q92569 461 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 NR4A3Q92570 626 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 HOXB13Q92826 284 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 RNF31Q96EP0 1072 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 RMND5BQ96G75 393 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 SPSB2Q99619 263 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF184Q99676 751 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 OSBPL10Q9BXB5 764 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 ZNF350Q9GZX5 532 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 SLC38A1Q9H2H9 487 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 Q9H521 79 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 THSD1Q9NS62 852 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 DKK4Q9UBT3 224 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PRDM4Q9UKN5 801 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 CBLCQ9ULV8 474 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 PTRH2Q9Y3E5 179 aaKnown RBP11.35□□□□□ -0.59
MRPL55-227ENST00000475832 DSPPQ9NZW4 1301 aa11.35□□□□□ -0.59
MRPL55-227ENST00000475832 URB1O60287 2271 aaKnown RBP11.34□□□□□ -0.59
MRPL55-227ENST00000475832 APC2O95996 2303 aa11.34□□□□□ -0.59
MRPL55-227ENST00000475832 PRAMEF27A3QJZ7 478 aa11.34□□□□□ -0.59
MRPL55-227ENST00000475832 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms