RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FPR3P25089 353 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ALDH4A1P30038 563 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 IFNA8P32881 189 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LIPAP38571 399 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 GIPRP48546 466 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 EPHA4P54764 986 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 RGS8P57771 180 aaPredicted RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 SKP1P63208 163 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP39-214ENST00000474572 RHAGQ02094 409 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ID2Q02363 134 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 PLAURQ03405 335 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ST3GAL4Q11206 333 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 FAM53BQ14153 422 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LARS2Q15031 903 aaKnown RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 NCF4Q15080 339 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 DEFB110Q30KQ9 67 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 C11orf91Q3C1V1 193 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 PLAG1Q6DJT9 500 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CASP12Q6UXS9 341 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 PRICKLE2Q7Z3G6 844 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 WDR53Q7Z5U6 358 aaPredicted RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 HMGN2P46Q86SG4 172 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 KIF18BQ86Y91 864 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CAMKK1Q8N5S9 505 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 OR6C4Q8NGE1 309 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LMX1AQ8TE12 382 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 SLC9A6Q92581 669 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 BORCS5Q969J3 196 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 NELL2Q99435 816 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 MCHR1Q99705 422 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 MAP3K3Q99759 626 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 RACGAP1Q9H0H5 632 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 AMBNQ9NP70 447 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ADAP2Q9NPF8 381 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 C11orf16Q9NQ32 467 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 MKLN1Q9UL63 735 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ZNF232Q9UNY5 417 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LSM2Q9Y333 95 aaKnown RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CLDN16Q9Y5I7 305 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CEP290O15078 2479 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 A0A1B0GVG6 124 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 TLCD2A6NGC4 264 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 CPSF4LA6NMK7 179 aaKnown RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 FAM170BA6NMN3 283 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 LMO7DNF2Z398 122 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 H3BN98 237 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 TGFBR3LH3BV60 316 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 FRS3O43559 492 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 BRINP1O60477 761 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 ENTPD6O75354 484 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 STX11O75558 287 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 ZBTB11O95625 1053 aaPredicted RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 DBTP11182 482 aaKnown RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 RNH1P13489 461 aaKnown RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 NR4A1P22736 598 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 POU1F1P28069 291 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 GALNSP34059 522 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 STAT5AP42229 794 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 PCYT1AP49585 367 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 SMSP52788 366 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 GAS1P54826 345 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 HNRNPKP61978 463 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP39-214ENST00000474572 POU6F2P78424 691 aaPredicted RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 ZNF91Q05481 1191 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 GINS1Q14691 196 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 UBXN2BQ14CS0 331 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 MAPK14Q16539 360 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 TIGD6Q17RP2 521 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 ACSM5Q6NUN0 579 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 DGAT2L6Q6ZPD8 337 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 PLEKHM3Q6ZWE6 761 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 MBOAT2Q6ZWT7 520 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 GDF7Q7Z4P5 450 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 GRAMD2AQ8IUY3 354 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 NKAIN4Q8IVV8 208 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 ZNF595Q8IYB9 648 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 CARFQ8N187 725 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 VWA5B2Q8N398 1253 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 SPEM1Q8N4L4 309 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 OR8D4Q8NGM9 314 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 OR9A4Q8NGU2 314 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 NDNFQ8TB73 568 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 PIGXQ8TBF5 258 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 DNASE2BQ8WZ79 361 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 CLDN23Q96B33 292 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 LGALS12Q96DT0 336 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 SLC41A3Q96GZ6 507 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 SHDQ96IW2 340 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 CD180Q99467 661 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 PRSS27Q9BQR3 290 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 TAPBPLQ9BX59 468 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 FOXQ1Q9C009 403 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 CTPS2Q9NRF8 586 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 OSGIN1Q9UJX0 560 aa9.13□□□□□ -0.95
USP39-214ENST00000474572 ZNF223Q9UK11 482 aaPredicted RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 PLCL2Q9UPR0 1127 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms