RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TNXAQ16473 311 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RPE65Q16518 533 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 HSD17B12Q53GQ0 312 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CT83Q5H943 113 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 NCMAPQ5T1S8 102 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 LEMD1Q68G75 181 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 C11orf63Q6NUN7 778 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 PARS2Q7L3T8 475 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 SLC16A9Q7RTY1 509 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RNF130Q86XS8 419 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZZZ3Q8IYH5 903 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 APCDD1Q8J025 514 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 GATSQ8NAP1 163 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ST6GALNAC3Q8NDV1 305 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 OR13D1Q8NGV5 346 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ASB11Q8WXH4 323 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 C11orf40Q8WZ69 217 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 PEX11GQ96HA9 241 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 TMEM176AQ96HP8 235 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 DCAF5Q96JK2 942 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZNF382Q96SR6 550 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RBM15Q96T37 977 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBR3-208ENST00000474426 EBF4Q9BQW3 602 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 MECRQ9BV79 373 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ING2Q9H160 280 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 POLD4Q9HCU8 107 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 HRASLSQ9HDD0 168 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 AGPAT4Q9NRZ5 378 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 THSD1Q9NS62 852 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZNF490Q9ULM2 529 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 PPIEQ9UNP9 301 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 SAR1BQ9Y6B6 198 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 EIF4G3O43432 1585 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 FANCAO15360 1455 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 A0A1W2PR77 199 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SPAG7O75391 227 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 DXOO77932 396 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 PRSS23O95084 383 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CLDN9O95484 217 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ETFAP13804 333 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ANOS1P23352 680 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CALCRP30988 508 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 MATKP42679 507 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RGS1Q08116 209 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 FGL1Q08830 312 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 FAAP100Q0VG06 881 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 DPYSL3Q14195 570 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 TMED2Q15363 201 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZNF630Q2M218 657 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 C4orf17Q53FE4 359 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SLC35F1Q5T1Q4 408 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CREB3L2Q70SY1 520 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ATG4DQ86TL0 474 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 GPC2Q8N158 579 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SMG8Q8ND04 991 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 CYB5D2Q8WUJ1 264 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 FKBP10Q96AY3 582 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 EAF2Q96CJ1 260 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 MRGPRX3Q96LB0 322 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 BHLHE41Q9C0J9 482 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 HAPLN2Q9GZV7 340 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 PORCNQ9H237 461 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ATXN3LQ9H3M9 355 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZNF334Q9HCZ1 680 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZFP64Q9NPA5 681 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 PDGFCQ9NRA1 345 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RHCGQ9UBD6 479 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SEC14L3Q9UDX4 400 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SERTAD3Q9UJW9 196 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SNX12Q9UMY4 172 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SSR3Q9UNL2 185 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RCE1Q9Y256 329 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CLIC4Q9Y696 253 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 EVPLQ92817 2033 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SF3B1O75533 1304 aaKnown RBP eCLIP3.26□□□□□ -1.899e-7■■■■■ 57.4
UBR3-208ENST00000474426 A0A1W2PP55 124 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 DISC1C4P0D8 188 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 BCAT2O15382 392 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 PSTPIP1O43586 416 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 BNIP3LO60238 219 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 WBP4O75554 376 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 ATG12O94817 140 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 GH1P01241 217 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CRYGBP07316 175 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 COMTP21964 271 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 OR1D2P34982 312 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 DDOSTP39656 456 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ADORA2A-AS1P86434 159 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 FAM3AP98173 230 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 PAX5Q02548 391 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SRSF1Q07955 248 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBR3-208ENST00000474426 PLA2G7Q13093 441 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZFP69Q49AA0 526 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ESRP1Q6NXG1 681 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 UQCC3Q6UW78 93 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CILP2Q8IUL8 1156 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SMYD4Q8IYR2 804 aaPredicted RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 ZCCHC9Q8N567 271 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 DCBLD1Q8N8Z6 715 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 CADM4Q8NFZ8 388 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms