RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TMCO2Q7Z6W1 182 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SCD5Q86SK9 330 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PRPF39Q86UA1 669 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HOOK3Q86VS8 718 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ECHDC2Q86YB7 292 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 UNC45BQ8IWX7 931 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF683Q8IZ20 524 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 C4orf33Q8N1A6 199 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NME8Q8N427 588 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PPFIBP2Q8ND30 876 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 FBXO36Q8NEA4 188 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 APPL2Q8NEU8 664 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC26Q8TAB7 109 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC110Q8TBZ0 833 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SPATA18Q8TC71 538 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MGARPQ8TDB4 240 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DQX1Q8TE96 717 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 GRK7Q8WTQ7 553 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RNF139Q8WU17 664 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DCAKDQ8WVC6 231 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 UBE2Q2Q8WVN8 375 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TEKT4Q8WW24 435 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ARNTL2Q8WYA1 636 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CASP10Q92851 521 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NT5C3BQ969T7 300 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NTAN1Q96AB6 310 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MOAP1Q96BY2 351 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 LRRC45Q96CN5 670 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SMARCD1Q96GM5 515 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PGAM5Q96HS1 289 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HSFY1Q96LI6 401 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SPATA13Q96N96 652 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RUNDC3BQ96NL0 473 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DACH2Q96NX9 599 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NECTIN4Q96NY8 510 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SERPINB12Q96P63 405 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF317Q96PQ6 595 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RNF157Q96PX1 679 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RUFY1Q96T51 708 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KCNK16Q96T55 309 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NAP1L3Q99457 506 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PAFAH2Q99487 392 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HNRNPABQ99729 332 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NCAPGQ9BPX3 1015 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SELENOSQ9BQE4 189 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CNPY3Q9BT09 278 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM121Q9BTD3 319 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MLPHQ9BV36 600 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM109Q9BVC6 243 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 C1QTNF1Q9BXJ1 281 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CALN1Q9BXU9 219 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CAPS2Q9BXY5 557 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DUSP16Q9BY84 665 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 FAM129AQ9BZQ8 928 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DHX35Q9H5Z1 703 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 FAM124BQ9H5Z6 455 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SYNCQ9H7C4 482 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CSNK1G1Q9HCP0 422 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 B3GAT2Q9NPZ5 323 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PPANQ9NQ55 473 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RGS18Q9NS28 235 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAN2C1Q9NTJ4 1040 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TBC1D13Q9NVG8 400 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HAUS2Q9NVX0 235 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 OSER1Q9NX31 292 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 OR6C2Q9NZP2 312 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 COX16Q9P0S2 106 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 WDR35Q9P2L0 1181 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MTRF1LQ9UGC7 380 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 LGALS13Q9UHV8 139 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 XPO7Q9UIA9 1087 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 OSGIN1Q9UJX0 560 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CDH9Q9ULB4 789 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MTUS1Q9ULD2 1270 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CHMP2BQ9UQN3 213 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PRG3Q9Y2Y8 225 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 UTP11Q9Y3A2 253 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 WIPI2Q9Y4P8 454 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PCDHGA5Q9Y5G8 931 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HEY1Q9Y5J3 304 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TEX264Q9Y6I9 313 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TECTAO75443 2155 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SF3B1O75533 1304 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SVILO95425 2214 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KNTC1P50748 2209 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 OTOGLQ3ZCN5 2332 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TLN1Q9Y490 2541 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SVEP1Q4LDE5 3571 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 COL27A1Q8IZC6 1860 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RTTNQ86VV8 2226 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IGF2RP11717 2491 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 NCOR2Q9Y618 2525 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 EXOC1LA0A1B0GW35 172 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 A0A1W2PPM1 405 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 A0A1W2PR80 420 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 hCG_1807616A0A1W2PRN6 198 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TCRBV9S1A1TA0A576 114 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM92AA1XBS5 289 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms