RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 CLEC12AQ5QGZ9 265 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 FRRS1Q6ZNA5 592 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 DGAT2L6Q6ZPD8 337 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PLEKHM3Q6ZWE6 761 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 RNF44Q7L0R7 432 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 GKN2Q86XP6 184 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 NKAIN4Q8IVV8 208 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PIP4P2Q8N4L2 257 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 COX18Q8N8Q8 333 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 NDNFQ8TB73 568 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 TBC1D15Q8TC07 691 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ZNF675Q8TD23 568 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 TANKQ92844 425 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 FAM46AQ96IP4 442 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PRRC1Q96M27 445 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SDF2Q99470 211 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 EGLN3Q9H6Z9 239 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 TRIM45Q9H8W5 580 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MTHFD2LQ9H903 347 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 GPN2Q9H9Y4 310 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 LYRM4Q9HD34 91 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MAN2C1Q9NTJ4 1040 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 IL20RAQ9UHF4 553 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 POMT2Q9UKY4 750 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MRPS17Q9Y2R5 130 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CHST2Q9Y4C5 530 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ZZEF1O43149 2961 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 LRP4O75096 1905 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 LOC100506127A0A0U1RQW1 187 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 GXYLT2A0PJZ3 443 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CHURC1-FNTBB4DL54 471 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 E9PQ18 207 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PEX12O00623 359 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ASNA1O43681 348 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CNOT3O75175 753 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CH25HO95992 272 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PTHP01270 115 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 DCNP07585 359 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CKMT1AP12532 417 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 GABRB1P18505 474 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SOX18P35713 384 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 LIPAP38571 399 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SEPHS1P49903 392 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 GFERP55789 205 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ST3GAL3Q11203 375 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 STX4Q12846 297 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 FZD5Q13467 585 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 LARS2Q15031 903 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MAPK14Q16539 360 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 TIGD6Q17RP2 521 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ZNF628Q5EBL2 1059 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SYT6Q5T7P8 510 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 TYW3Q6IPR3 259 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ACSM5Q6NUN0 579 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 KLHL35Q6PF15 583 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SLCO6A1Q86UG4 719 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 OR52R1Q8NGF1 315 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 WDR36Q8NI36 951 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 CLIP3Q96DZ5 547 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MMABQ96EY8 250 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 RBM18Q96H35 190 aaKnown RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ITPAQ9BY32 194 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 DSN1Q9H410 356 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PLCXD1Q9NUJ7 323 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 UCKL1Q9NWZ5 548 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 PTGFRNQ9P2B2 879 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ACAD8Q9UKU7 415 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 C19orf53Q9UNZ5 99 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 ZNF443Q9Y2A4 671 aaPredicted RBP4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 MAU2Q9Y6X3 613 aa4.54□□□□□ -1.68
TM4SF1-202ENST00000472441 SPTA1P02549 2419 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ARRDC5A6NEK1 342 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 RHPN2P1A8MT19 583 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 J3QRK9 145 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 HAX1O00165 279 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 AQP9O43315 295 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 APOL3O95236 402 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 MED26O95402 600 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 NADKO95544 446 aaPredicted RBP4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ALAS2P22557 587 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 MLLT3P42568 568 aaPredicted RBP4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 GPR4P46093 362 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 GIPRP48546 466 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 PGDP52209 483 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 BTG2P78543 158 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ZNF155Q12901 538 aaPredicted RBP4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 KCNAB1Q14722 419 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 TRAM2Q15035 370 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 NNATQ16517 81 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 SNAPC1Q16533 368 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 PRICKLE4Q2TBC4 344 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ARHGAP11BQ3KRB8 267 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 AMZ1Q400G9 498 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ANKDD1AQ495B1 522 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ARMCX4Q5H9R4 360 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 MANEAQ5SRI9 462 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 DCST2Q5T1A1 773 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ZNF836Q6ZNA1 936 aa4.53□□□□□ -1.68
TM4SF1-202ENST00000472441 ADCK1Q86TW2 530 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms