RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CHDHQ8NE62 594 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 OR4N2Q8NGD1 307 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 DIO2Q92813 273 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 PMM1Q92871 262 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 EXTL1Q92935 676 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 REXO5Q96IC2 774 aaKnown RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 SGCZQ96LD1 299 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 ADOQ96SZ5 270 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 KCTD14Q9BQ13 255 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 TRIM8Q9BZR9 551 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCM2-205ENST00000472223 SERHL2Q9H4I8 314 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 IKZF5Q9H5V7 419 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 TMEM38AQ9H6F2 299 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 ZNF552Q9H707 407 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 TMEM181Q9P2C4 612 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 WDR45Q9Y484 360 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 MED13Q9UHV7 2174 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 A0A0G2JPF8 293 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 ELOVL7A1L3X0 281 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 OR6C70A6NIJ9 312 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 FAM220BPB1ANY3 271 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HNRNPCL2B2RXH8 293 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HNRNPCL3B7ZW38 293 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 TNFRSF21O75509 655 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 PDE9AO76083 593 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 BCHEP06276 602 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 FBXO45P0C2W1 286 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HNRNPCL4P0DMR1 293 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 SOX3P41225 446 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 POLE2P56282 527 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 RHDQ02161 417 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 SCARB2Q14108 478 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 ZSCAN26Q16670 478 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCM2-205ENST00000472223 FLYWCH1Q4VC44 716 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 EXOSC6Q5RKV6 272 aaKnown RBP15.54■□□□□ 0.08
CCM2-205ENST00000472223 HEPHL1Q6MZM0 1159 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 REEP3Q6NUK4 255 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 LRRC74BQ6ZQY2 392 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 RTL4Q6ZR62 310 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HPS6Q86YV9 775 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 CYP4Z2PQ8N1L4 340 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HIPK4Q8NE63 616 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 OR5M3Q8NGP4 307 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 FBXO27Q8NI29 283 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 TTC9Q92623 222 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 EFHD2Q96C19 240 aaPredicted RBP15.54■□□□□ 0.08
CCM2-205ENST00000472223 SPACA9Q96E40 222 aaPredicted RBP15.54■□□□□ 0.08
CCM2-205ENST00000472223 ZNF607Q96SK3 696 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 SDF2Q99470 211 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 THTPAQ9BU02 230 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 SPATA5L1Q9BVQ7 753 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 RNF32Q9H0A6 362 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 HHATLQ9HCP6 504 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 TIMMDC1Q9NPL8 285 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 CMTM6Q9NX76 183 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 LRFN1Q9P244 771 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 ABCD2Q9UBJ2 740 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 KCNE3Q9Y6H6 103 aa15.54■□□□□ 0.08
CCM2-205ENST00000472223 H3BNH8 94 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 NME4O00746 187 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 SERPINB7O75635 380 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 OR6B1O95007 311 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 NADKO95544 446 aaPredicted RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 IFNA14P01570 189 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 C1QCP02747 245 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 TFPTP0C1Z6 253 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 ARAFP10398 606 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 CPOXP36551 454 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 GPR68Q15743 365 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 SYPL1Q16563 259 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 ST3GAL2Q16842 350 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 VMACQ2NL98 169 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 CCNJQ5T5M9 372 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 PRAMEF8Q5VWM4 474 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 PRAMEF7Q5VXH5 474 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 YTHDF3Q7Z739 585 aaKnown RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 NFKBIDQ8NI38 313 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 BBS10Q8TAM1 723 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 FAM110BQ8TC76 370 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 SPPL2AQ8TCT8 520 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 SLC38A5Q8WUX1 472 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 HAS2Q92819 552 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 ZNF583Q96ND8 569 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 CNTNAP3BQ96NU0 1288 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 SMAD5Q99717 465 aaKnown RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 CNTNAP3Q9BZ76 1288 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 MMADHCQ9H3L0 296 aaPredicted RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 ARMC7Q9H6L4 198 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 MTHFD2LQ9H903 347 aaPredicted RBP15.53■□□□□ 0.08
CCM2-205ENST00000472223 UBQLN4Q9NRR5 601 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 ZNF232Q9UNY5 417 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 DMXL2Q8TDJ6 3036 aa15.53■□□□□ 0.08
CCM2-205ENST00000472223 OR5H15A6NDH6 313 aa15.52■□□□□ 0.08
CCM2-205ENST00000472223 SCDO00767 359 aa15.52■□□□□ 0.08
CCM2-205ENST00000472223 TSPAN2O60636 221 aa15.52■□□□□ 0.08
CCM2-205ENST00000472223 H6PDO95479 791 aa15.52■□□□□ 0.08
CCM2-205ENST00000472223 WDPCPO95876 746 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms