RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 RNF130Q86XS8 419 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 MSRB3Q8IXL7 192 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
PRKCB-205ENST00000472066 DPP10Q8N608 796 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 PNPT1Q8TCS8 783 aaKnown RBP11.31□□□□□ -0.6
PRKCB-205ENST00000472066 XAGE5Q8WWM1 108 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 RAB8BQ92930 207 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
PRKCB-205ENST00000472066 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-205ENST00000472066 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 FAM173AQ9BQD7 235 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 ANGPTL4Q9BY76 406 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 FBXO34Q9NWN3 711 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 VAPAQ9P0L0 249 aa11.31□□□□□ -0.6
PRKCB-205ENST00000472066 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 CPAMD8Q8IZJ3 1885 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 TRBV5-3A0A0A0MS03 114 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 BBIP1A8MTZ0 92 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 CLIC1O00299 241 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 HMGN4O00479 90 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 FADS1O60427 444 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 UNC5CO95185 931 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 MAGEA8P43361 318 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 DNASE1L1P49184 302 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 KHKP50053 298 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 MEOX1P50221 254 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 ANXA11P50995 505 aaKnown RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 MLLT10P55197 1068 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 STX5Q13190 355 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 NFYCQ13952 458 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 INPP5JQ15735 1006 aaPredicted RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 RUNDC3AQ59EK9 446 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 COQ5Q5HYK3 327 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 TBCELQ5QJ74 424 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 DCST2Q5T1A1 773 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 CCNJQ5T5M9 372 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 HEPHL1Q6MZM0 1159 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 ZFP62Q8NB50 900 aaPredicted RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 FAM98AQ8NCA5 519 aaKnown RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 CHDHQ8NE62 594 aaPredicted RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 OR52N2Q8NGI0 321 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 RP9Q8TA86 221 aaKnown RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 SDF2Q99470 211 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 METTL7AQ9H8H3 244 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 EXD2Q9NVH0 621 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 GMEB1Q9Y692 573 aa11.3□□□□□ -0.6
PRKCB-205ENST00000472066 SMG1Q96Q15 3661 aaKnown RBP11.3□□□□□ -0.6
PRKCB-205ENST00000472066 PRAMEF27A3QJZ7 478 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 PRAMEF25A6NGN4 478 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 MRASO14807 208 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 HS6ST1O60243 411 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 ICOSLGO75144 302 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 DCTN3O75935 186 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 SNX4O95219 450 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 UTS2O95399 124 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 AK1P00568 194 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 COX4I1P13073 169 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 ETFAP13804 333 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 LCN1P31025 176 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 PTGDSP41222 190 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 CRATP43155 626 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 KCNJ2P63252 427 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 PMP22Q01453 160 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 FOXO1Q12778 655 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 SNTA1Q13424 505 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 RGNQ15493 299 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 ARHGAP11BQ3KRB8 267 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 MMEL1Q495T6 779 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 PRR30Q53SZ7 412 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 ATAD3BQ5T9A4 648 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 REP15Q6BDI9 236 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 DHDDSQ86SQ9 333 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 POGLUT1Q8NBL1 392 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 OR4C3Q8NH37 302 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 FRMD6Q96NE9 622 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms