RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NPIPA5A0A0B4J1W7 369 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 C2orf92A0A1B0GVN3 265 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 TCRBV3S1A0A5B6 114 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ELOVL7A1L3X0 281 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ERICH4A6NGS2 130 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 AGAP5A6NIR3 686 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 NPIPA7E9PJI5 369 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 H3BNX3 289 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 WWP2O00308 870 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ARPC2O15144 300 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 NEURL1O76050 574 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 WISP2O76076 250 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 H6PDO95479 791 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ANP32DO95626 131 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ALPPP05187 535 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 NPIPA8P0DM63 369 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PRKAR1AP10644 381 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CYP4B1P13584 511 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 NQO1P15559 274 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PPIBP23284 216 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 KDELR2P33947 212 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PRIM2P49643 509 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 EEF1A1P68104 462 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CDK6Q00534 326 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 RBBP4Q09028 425 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 TRIM25Q14258 630 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CD226Q15762 336 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 NPTX1Q15818 432 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CYP27C1Q4G0S4 372 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 DNAL1Q4LDG9 190 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 GCNT6Q5T4J0 391 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PRAMEF8Q5VWM4 474 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PRAMEF7Q5VXH5 474 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 LCN8Q6JVE9 175 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 LRRC74BQ6ZQY2 392 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ARPINQ7Z6K5 226 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 LACC1Q8IV20 430 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ARHGAP24Q8N264 748 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 TRIML2Q8N7C3 387 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 FAM71CQ8NEG0 241 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 FDCSPQ8NFU4 85 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 THAP3Q8WTV1 239 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PHF10Q8WUB8 498 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 SLC9A6Q92581 669 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 DIO2Q92813 273 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 TMBIM1Q969X1 311 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 DUS3LQ96G46 650 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 FRMD6Q96NE9 622 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 SPATA9Q9BWV2 254 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 MMADHCQ9H3L0 296 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CDCP1Q9H5V8 836 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 DEPPQ9NTK1 212 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 ADA2Q9NZK5 511 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 SUCOQ9UBS9 1254 aaKnown RBP9.09□□□□□ -0.95
SF3A1-207ENST00000471342 PRODH2Q9UF12 536 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 CBLCQ9ULV8 474 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 DOCK10Q96BY6 2186 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ARGFXA6NJG6 315 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 TTC36A6NLP5 189 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF891A8MT65 544 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 M0QX08 132 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ACOX3O15254 700 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 PRSS23O95084 383 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 LYPD3O95274 346 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 THY1P04216 161 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 BCHEP06276 602 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 NGFRP08138 427 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ALOX5P09917 674 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 NAGAP17050 411 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 TCN1P20061 433 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 CHI3L1P36222 383 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SOX3P41225 446 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF136P52737 540 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 FBXW4P57775 412 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 DCAF7P61962 342 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 POU6F2P78424 691 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 KCNJ10P78508 379 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 TXNL4AP83876 142 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 FOXO1Q12778 655 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF155Q12901 538 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 AIMP2Q13155 320 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SCARB2Q14108 478 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 INPP5JQ15735 1006 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 NTRK2Q16620 822 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF630Q2M218 657 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 GRAMD1BQ3KR37 738 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SPDYE7PQ495Y7 208 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SAMD4BQ5PRF9 694 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 GLYATQ6IB77 296 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 TMEM81Q6P7N7 255 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 MDGA2Q7Z553 956 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 RAB43Q86YS6 212 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ADGRG5Q8IZF4 528 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 CLIP4Q8N3C7 705 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 METTL25Q8N6Q8 603 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SIRT6Q8N6T7 355 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms