RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GFM2Q969S9 779 aaKnown RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 COQ8BQ96D53 544 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 NSL1Q96IY1 281 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 MAPKAP1Q9BPZ7 522 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ALOXE3Q9BYJ1 711 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 BHLHE41Q9C0J9 482 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 OR8D2Q9GZM6 311 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF703Q9H7S9 590 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 SH2D2AQ9NP31 389 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ARL8BQ9NVJ2 186 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 TUBA8Q9NY65 449 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-206ENST00000471037 TAS2R7Q9NYW3 318 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ACAD8Q9UKU7 415 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ATG4BQ9Y4P1 393 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 PCDHA9Q9Y5H5 950 aa8.33□□□□□ -1.08
SF3A1-206ENST00000471037 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ANKHD1Q8IWZ3 2542 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 DNAJC13O75165 2243 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 LOC100653049A0A140TA62 436 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 A0A1W2PR48 441 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 C17orf105B2RV13 164 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 C9JVG2 144 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ANGPT2O15123 496 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 KRT34O76011 436 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 P04436 131 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 PGRP06401 933 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 FOSL1P15407 271 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ENDOUP21128 410 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 KIR2DL3P43628 341 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ALDH9A1P49189 494 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 STX4Q12846 297 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 BNIP1Q12981 228 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SLC10A1Q14973 349 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 CEBPEQ15744 281 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 MMEL1Q495T6 779 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 TIGD2Q4W5G0 525 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SPANXN4Q5MJ08 99 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ANXA8L1Q5VT79 327 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 OR52E8Q6IFG1 317 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SLC48A1Q6P1K1 146 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 YTHDF3Q7Z739 585 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SAMD14Q8IZD0 417 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 FBXW8Q8N3Y1 598 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 PCYOX1LQ8NBM8 494 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 VPS37AQ8NEZ2 397 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 OR7A2PQ8NGA2 310 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 NUBPLQ8TB37 319 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 PAQR8Q8TEZ7 354 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF721Q8TF20 911 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 RMND5BQ96G75 393 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 GPATCH1Q9BRR8 931 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 DUSP26Q9BV47 211 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 LIME1Q9H400 295 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 LDAHQ9H6V9 325 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 RMND5AQ9H871 391 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SLC52A3Q9NQ40 469 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 GIMAP4Q9NUV9 329 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 FAM120CQ9NX05 1096 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SH3BP4Q9P0V3 963 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 SPRR3Q9UBC9 169 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 COPS7AQ9UBW8 275 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 LEF1Q9UJU2 399 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 PSME2Q9UL46 239 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 EDARQ9UNE0 448 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 EXO1Q9UQ84 846 aaKnown RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 RPH3AQ9Y2J0 694 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-206ENST00000471037 NDUFAF1Q9Y375 327 aa8.32□□□□□ -1.08
SF3A1-206ENST00000471037 NAV3Q8IVL0 2385 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 TRGV5A0A0B4J1U4 118 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 A6NNC1 897 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 HSPB2A8KAH6 182 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 SYT5O00445 386 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 RNASET2O00584 256 aaKnown RBP8.31□□□□□ -1.08
SF3A1-206ENST00000471037 LDB3O75112 727 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 IGKV3-11P04433 115 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 LAMP1P11279 417 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 DNASE1P24855 282 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 RASSF2P50749 326 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 DGKQP52824 942 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 IGLV3-21P80748 117 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-206ENST00000471037 FOXD4Q12950 439 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-206ENST00000471037 HSPB2Q16082 182 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 PGS1Q32NB8 556 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF791Q3KP31 576 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-206ENST00000471037 FBXL19-AS1Q494R0 122 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 VPS26BQ4G0F5 336 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 FLYWCH1Q4VC44 716 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 C18orf63Q68DL7 685 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 REP15Q6BDI9 236 aa8.31□□□□□ -1.08
SF3A1-206ENST00000471037 LYPD8Q6UX82 237 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms