RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TCN1P20061 433 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 S1PR1P21453 382 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 IL10P22301 178 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RBMS1P29558 406 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PRDX6P30041 224 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RPL3P39023 403 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RASSF2P50749 326 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 NCBP2P52298 156 aaKnown RBP eCLIP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 OCA2Q04671 838 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MGAT2Q10469 447 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 SELPLGQ14242 412 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CAPRIN1Q14444 709 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 NSDHLQ15738 373 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MAPKAPK3Q16644 382 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 TRMT12Q53H54 448 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF628Q5EBL2 1059 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 C6orf10Q5SRN2 563 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 LRIF1Q5T3J3 769 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MFSD4BQ5TF39 518 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 C8orf82Q6P1X6 216 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 FAM111BQ6SJ93 734 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DPP10Q8N608 796 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF321PQ8N8H1 164 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PLPP5Q8NEB5 264 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 NLGN4YQ8NFZ3 816 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PSMA8Q8TAA3 256 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ADAMTS18Q8TE60 1221 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 STARD8Q92502 1023 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 KAT2AQ92830 837 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 C8orf44Q96CB5 159 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CMTM5Q96DZ9 223 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 AURKBQ96GD4 344 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 C20orf173Q96LM9 149 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CCDC115Q96NT0 180 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PANX1Q96RD7 426 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PRPF18Q99633 342 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 BTBD2Q9BX70 525 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 WDR54Q9H977 334 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 IL1RL2Q9HB29 575 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ACSS1Q9NUB1 689 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MRGBPQ9NV56 204 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ATAD3AQ9NVI7 634 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 FAM120CQ9NX05 1096 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 TAS2R9Q9NYW1 312 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 IL17BQ9UHF5 180 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 BTNL2Q9UIR0 455 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 LEF1Q9UJU2 399 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 C3orf18Q9UK00 162 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 FBXO9Q9UK97 447 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CROTQ9UKG9 612 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MRPS18BQ9Y676 258 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 FRYQ5TBA9 3013 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 SDK2Q58EX2 2172 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 BBIP1A8MTZ0 92 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 A8MUA0 341 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 UPK1AO00322 258 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RFXANKO14593 260 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ALOX12BO75342 701 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ANP32DO95626 131 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CPSF4O95639 269 aaKnown RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CLPSP04118 112 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 SLC35E2P0CK97 266 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DLSTP36957 453 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MC3RP41968 323 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 STT3AP46977 705 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MVDP53602 400 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 EMP2P54851 167 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CASP9P55211 416 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MS4A2Q01362 244 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 STX4Q12846 297 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 STX5Q13190 355 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DUSP8Q13202 625 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RIPK1Q13546 671 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DNASE1L3Q13609 305 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 IL10RAQ13651 578 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CCNIQ14094 377 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MYBPC3Q14896 1274 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MLC1Q15049 377 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RCN1Q15293 331 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MAPRE2Q15555 327 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PRICKLE4Q2TBC4 344 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MMEL1Q495T6 779 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 COQ5Q5HYK3 327 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ANXA8L1Q5VT79 327 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 TMEM205Q6UW68 189 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 TMEM107Q6UX40 140 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MSANTD1Q6ZTZ1 278 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 GPR155Q7Z3F1 870 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ANKRD37Q7Z713 158 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 DHDDSQ86SQ9 333 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ST13P4Q8IZP2 240 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 LRRC25Q8N386 305 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ESX1Q8N693 406 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 OR7G2Q8NG99 324 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 OR4A15Q8NGL6 344 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms