RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RPL13AP3Q6NVV1 102 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 CDC73Q6P1J9 531 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 RASSF6Q6ZTQ3 369 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 CDK20Q8IZL9 346 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 NANOGP1Q8N7R0 232 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 OR4E2Q8NGC2 313 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 OR52L1Q8NGH7 329 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 OR6T1Q8NGN1 323 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 SETD6Q8TBK2 473 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 TMEM163Q8TC26 289 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 SLC7A13Q8TCU3 470 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ELP4Q96EB1 424 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 LRR1Q96L50 414 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 OPALINQ96PE5 141 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ARHGDIGQ99819 225 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 CNPPD1Q9BV87 410 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ASPNQ9BXN1 380 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 CHRDQ9H2X0 955 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 SERHL2Q9H4I8 314 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 KLHL31Q9H511 634 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 SYNDIG1Q9H7V2 258 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 MTHFD2LQ9H903 347 aaPredicted RBP7.49□□□□□ -1.21
SMC4-212ENST00000470240 SMURF1Q9HCE7 757 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ISYNA1Q9NPH2 558 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 MED17Q9NVC6 651 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 C14orf105Q9NVL8 296 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 NDUFB11Q9NX14 153 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 PTGFRNQ9P2B2 879 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 FBXL21Q9UKT6 434 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ATG4BQ9Y4P1 393 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 ENTPD2Q9Y5L3 495 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 PMF1-BGLAPU3KQ54 211 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 BPTFQ12830 3046 aa7.49□□□□□ -1.21
SMC4-212ENST00000470240 PRRC2BQ5JSZ5 2229 aaKnown RBP7.49□□□□□ -1.21
SMC4-212ENST00000470240 HEATR5BQ9P2D3 2071 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 HYKKA2RU49 373 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 CPSF4LA6NMK7 179 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 C2orf74A8MZ97 194 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ZNF670-ZNF695F2Z2N8 137 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 BOLA2-SMG1P6H3BVE0 249 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 PGRMC2O15173 223 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 RGS5O15539 181 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 TBX1O43435 398 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 LATO43561 262 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 NDUFB5O43674 189 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 DYRK3O43781 588 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 AKAP8O43823 692 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 PRICKLE3O43900 615 aaPredicted RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 TPST2O60704 377 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 B4GALT2O60909 372 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 CSO75390 466 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 RASGRP1O95267 797 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 IL1AP01583 271 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 IFI6P09912 130 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ZNF888P0CJ79 500 aaPredicted RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 C8orf89P0DMQ9 161 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ACP2P11117 423 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 LAMP2P13473 410 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 EPHA1P21709 976 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 MMP11P24347 488 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 FPR3P25089 353 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 NOS3P29474 1203 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ATP6V1E1P36543 226 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ETV6P41212 452 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 KIR2DL1P43626 348 aaPredicted RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 TMED10P49755 219 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 RPS3AP61247 264 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 YPEL5P62699 121 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 MRPS21P82921 87 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 CDK5Q00535 292 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ILF3Q12906 894 aaKnown RBP eCLIP7.48□□□□□ -1.218e-14■■■■■ 40.3
SMC4-212ENST00000470240 CBX3Q13185 183 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 CEBPEQ15744 281 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 DECR1Q16698 335 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 MINDY4Q4G0A6 757 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 C2orf27AQ580R0 203 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 NKAPLQ5M9Q1 402 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 EOGTQ5NDL2 527 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 C18orf63Q68DL7 685 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ARMC6Q6NXE6 501 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ZCCHC12Q6PEW1 402 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 C19orf48Q6RUI8 117 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 KIAA1324Q6UXG2 1013 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 TMEM184AQ6ZMB5 413 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 RD3Q7Z3Z2 195 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 SPRED2Q7Z698 418 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 PAQR7Q86WK9 346 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 LYSMD2Q8IV50 215 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 GID4Q8IVV7 300 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 FBXL6Q8N531 539 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 PARP16Q8N5Y8 322 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 PSD4Q8NDX1 1056 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 OR9A2Q8NGT5 310 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 OR52P1PQ8NH57 321 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 ACOT11Q8WXI4 607 aaPredicted RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 PMM1Q92871 262 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 FAM131CQ96AQ9 280 aa7.48□□□□□ -1.21
SMC4-212ENST00000470240 MRPL38Q96DV4 380 aaKnown RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 CNRIP1Q96F85 164 aaPredicted RBP7.48□□□□□ -1.21
SMC4-212ENST00000470240 ZNF582Q96NG8 517 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms