RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ACTBP60709 375 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 ACTG1P63261 375 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 BTN3A2P78410 334 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 RASGEF1BQ0VAM2 473 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 KCNAB2Q13303 367 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 Q6ZSR6 202 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 SLC7A13Q8TCU3 470 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 ADAMTS18Q8TE60 1221 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 RNF121Q9H920 327 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 FAM86C1Q9NVL1 165 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 MALT1Q9UDY8 824 aa6.59□□□□□ -1.35
GAPVD1-215ENST00000470056 H3BQ06 376 aaPredicted RBP6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 PLPP1O14494 284 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 CPN2P22792 545 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 BSGP35613 385 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 RPP38P78345 283 aaKnown RBP6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 C4orf46Q504U0 113 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 MANEAQ5SRI9 462 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 ZBTB46Q86UZ6 589 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 UBE2J2Q8N2K1 259 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 RNF175Q8N4F7 328 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 S100PBPQ96BU1 408 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 MROQ9BYG7 248 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 ZCCHC3Q9NUD5 404 aaKnown RBP6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 PADI2Q9Y2J8 665 aa6.59□□□□□ -1.36
GAPVD1-215ENST00000470056 ADAP00813 363 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FHP07954 510 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SNTA1Q13424 505 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 MLC1Q15049 377 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 COL28A1Q2UY09 1125 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PRAMEF17Q5VTA0 474 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF613Q6PF04 617 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CEACAM20Q6UY09 585 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 MAFIPQ8WZ33 124 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 KCTD12Q96CX2 325 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 NEURL3Q96EH8 262 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 HSPA12BQ96MM6 686 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 DPH2Q9BQC3 489 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PBDC1Q9BVG4 233 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SARGQ9BW04 601 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TAS2R3Q9NYW6 316 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FEZF1A0PJY2 475 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 H3BUI4 141 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 GBAP04062 536 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ARAFP10398 606 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 COL9A1P20849 921 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 DCTP40126 519 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CDH15P55291 814 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SELENOWP63302 87 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ST3GAL4Q11206 333 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SLC5A12Q1EHB4 618 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FAM219BQ5XKK7 198 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 OR2A1Q8NGT9 310 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 OR14K1Q8NGZ2 314 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 RHOXF1Q8NHV9 184 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 NFKBIDQ8NI38 313 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 OR1E3Q8WZA6 343 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TM4SF18Q96CE8 201 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CNOT2Q9NZN8 540 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FBXW2Q9UKT8 454 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 LIPT1Q9Y234 373 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PAHP00439 452 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PRH1P02810 166 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ALPLP05186 524 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FMO3P31513 532 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 HBA1P69905 142 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 NDUFAF5Q5TEU4 345 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TMEM64Q6YI46 380 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 LINGO2Q7L985 606 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 C1orf216Q8TAB5 229 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 BTF3L4Q96K17 158 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 NECAB3Q96P71 396 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 KCNS3Q9BQ31 491 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TBC1D17Q9HA65 648 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CHMP1AQ9HD42 196 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 IFT46Q9NQC8 304 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CEPT1Q9Y6K0 416 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 BLACEA4D250 179 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 C7orf72A4D263 438 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 C1orf196B1AJZ1 125 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CDC40O60508 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PSMB5P28074 263 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FGL2Q14314 439 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CRB2Q5IJ48 1285 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SYT13Q7L8C5 426 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 RADILQ96JH8 1075 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ASPNQ9BXN1 380 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 IKZF5Q9H5V7 419 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 EVA1AQ9H8M9 152 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SLC35C2Q9NQQ7 365 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 KCNIP3Q9Y2W7 256 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PCDHGA4Q9Y5G9 962 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 XPNPEP2O43895 674 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 THEGLP0DJG4 465 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ITGAMP11215 1152 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CHMP24386 653 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms