RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 DSPPQ9NZW4 1301 aa19.18■□□□□ 0.66
BRAF-202ENST00000469930 A8MUI8 341 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 ZNF354AO60765 605 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 PPM1BO75688 479 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 OR2J2O76002 312 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 NGFRP08138 427 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 NR2F1P10589 423 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 ETS2P15036 469 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 SSR4P51571 173 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 PCBP3P57721 371 aaKnown RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 SCARB2Q14108 478 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 EFR3AQ14156 821 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 SYPL1Q16563 259 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 ZNF791Q3KP31 576 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 AGAP7PQ5VUJ5 663 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 TMEM81Q6P7N7 255 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 IGFL2Q6UWQ7 119 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 NUP54Q7Z3B4 507 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 ANKFN1Q8N957 763 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 OR52E4Q8NGH9 312 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 BBS10Q8TAM1 723 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 THAP3Q8WTV1 239 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 TTC9Q92623 222 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 TMBIM1Q969X1 311 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 OMA1Q96E52 524 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 RMND5BQ96G75 393 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 AGAP4Q96P64 663 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 SECISBP2Q96T21 854 aaKnown RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 HOXD1Q9GZZ0 328 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 SLC38A1Q9H2H9 487 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 ZNF552Q9H707 407 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 MTHFD2LQ9H903 347 aaPredicted RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 SUCOQ9UBS9 1254 aaKnown RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 PCDHGA10Q9Y5H3 936 aa19.17■□□□□ 0.66
BRAF-202ENST00000469930 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.17■□□□□ 0.66
BRAF-202ENST00000469930 ACACAQ13085 2346 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 NPIPB9F8W1W9 429 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 PGM3O95394 542 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 IGKV1D-16P01601 117 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 ITGB2P05107 769 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 PLCXD2Q0VAA5 305 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 TRAP1Q12931 704 aaKnown RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 ELOAQ14241 798 aaKnown RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 NTRK2Q16620 822 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 ABHD17BQ5VST6 288 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 ISLR2Q6UXK2 745 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 SIRT6Q8N6T7 355 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 RNF138Q8WVD3 245 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 MAL2Q969L2 176 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 MCUR1Q96AQ8 359 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 OTUB1Q96FW1 271 aaPredicted RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 TMEM19Q96HH6 336 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 TREX2Q9BQ50 279 aaPredicted RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 CPNE5Q9HCH3 593 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 STMN3Q9NZ72 180 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 ANGPT4Q9Y264 503 aa19.16■□□□□ 0.66
BRAF-202ENST00000469930 PCDHGA9Q9Y5G4 932 aaKnown RBP19.16■□□□□ 0.66
BRAF-202ENST00000469930 C5orf58C9J3I9 102 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 SLC28A2O43868 658 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 H6PDO95479 791 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 BCHEP06276 602 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 CHRM4P08173 479 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 GGT1P19440 569 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 KRT20P35900 424 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 MFAP5Q13361 173 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 TRIM25Q14258 630 aaKnown RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 NNATQ16517 81 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 GPAT3Q53EU6 434 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 TYW3Q6IPR3 259 aaKnown RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 FRRS1Q6ZNA5 592 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 C16orf47Q6ZP98 133 aaPredicted RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 PATL1Q86TB9 770 aaKnown RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 IFNEQ86WN2 208 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 ULK2Q8IYT8 1036 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 NFKBIDQ8NI38 313 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 SPACA9Q96E40 222 aaPredicted RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 SGCZQ96LD1 299 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 COL21A1Q96P44 957 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 SMAD5Q99717 465 aaKnown RBP19.15■□□□□ 0.66
BRAF-202ENST00000469930 RUBCNLQ9H714 662 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 GORASP2Q9H8Y8 452 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 GPR83Q9NYM4 423 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 ABI3Q9P2A4 366 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 WDR45Q9Y484 360 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 PCDHGB7Q9Y5F8 929 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 DOCK10Q96BY6 2186 aa19.15■□□□□ 0.66
BRAF-202ENST00000469930 KIAA0513O60268 411 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 MAN1A2O60476 641 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 REM1O75628 298 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 PDE9AO76083 593 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 ZIC2O95409 532 aaPredicted RBP19.14■□□□□ 0.65
BRAF-202ENST00000469930 ATP6V1C1P21283 382 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 RPS4Y1P22090 263 aaKnown RBP19.14■□□□□ 0.65
BRAF-202ENST00000469930 HLCSP50747 726 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 CCL11P51671 97 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 HPCAP84074 193 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 CHRNEQ04844 493 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 ZNF141Q15928 474 aa19.14■□□□□ 0.65
BRAF-202ENST00000469930 B3GNTL1Q67FW5 361 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms