RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MYRFQ9Y2G1 1151 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 AGAP5A6NIR3 686 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 KIAA0513O60268 411 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 UGT2B17O75795 530 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 KCNK2O95069 426 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 ITGAMP11215 1152 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 LARS2Q15031 903 aaKnown RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 NPTX1Q15818 432 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 NNATQ16517 81 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 CLPPQ16740 277 aaPredicted RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 PLA2G2CQ5R387 149 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 ZNF836Q6ZNA1 936 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 COX15Q7KZN9 410 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 C8orf59Q8N0T1 100 aaPredicted RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 OR4N2Q8NGD1 307 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 RHBDD1Q8TEB9 315 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 PTPMT1Q8WUK0 201 aaPredicted RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 ARHGDIGQ99819 225 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 APMAPQ9HDC9 416 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 CTPS2Q9NRF8 586 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 MKL2Q9ULH7 1088 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 H3BNH8 94 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 PEX12O00623 359 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 BRINP1O60477 761 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 SMIM18P0DKX4 95 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 ANXA8P13928 327 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 CSTF2P33240 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMC4-211ENST00000469858 NSDHLQ15738 373 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 MAPK14Q16539 360 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 LAPTM4BQ86VI4 370 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 TSPYL5Q86VY4 417 aaPredicted RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 PPP1R3BQ86XI6 285 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 TMEM151BQ8IW70 566 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 ZNF615Q8N8J6 731 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 SENP5Q96HI0 755 aaPredicted RBP16.84■□□□□ 0.29
SMC4-211ENST00000469858 DHRS1Q96LJ7 313 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 SAP130Q9H0E3 1048 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 SLC22A11Q9NSA0 550 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 TMCC3Q9ULS5 477 aa16.84■□□□□ 0.29
SMC4-211ENST00000469858 BCKDKO14874 412 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 SLC16A6O15403 523 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 TPST2O60704 377 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 SOX30O94993 753 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 CLPSP04118 112 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
SMC4-211ENST00000469858 RGS8P57771 180 aaPredicted RBP16.83■□□□□ 0.28
SMC4-211ENST00000469858 NPSR1Q6W5P4 371 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 SHISA6Q6ZSJ9 500 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 ZAR1Q86SH2 424 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 PRRC1Q96M27 445 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 NIPSNAP1Q9BPW8 284 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 FNDC11Q9BVV2 318 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 PRR14Q9BWN1 585 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 ITPAQ9BY32 194 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 ING2Q9H160 280 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 Q9N2J8 555 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 PAPOLBQ9NRJ5 636 aaKnown RBP16.83■□□□□ 0.28
SMC4-211ENST00000469858 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 PCDHGB2Q9Y5G2 931 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 CLCA3PQ9Y6N3 262 aa16.83■□□□□ 0.28
SMC4-211ENST00000469858 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 DPPA5A6NC42 116 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 EFCAB7A8K855 629 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 FLRT2O43155 660 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 DYRK3O43781 588 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 DBIP07108 87 aaKnown RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 THBS1P07996 1170 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 POU2F1P14859 743 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 RPS4Y1P22090 263 aaKnown RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 RNF144AP50876 292 aaPredicted RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 FOXL2P58012 376 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 DCST1Q5T197 706 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 DBX2Q6ZNG2 339 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 ZNF321PQ8N8H1 164 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 AQP11Q8NBQ7 271 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 CTRCQ99895 268 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 GRIP2Q9C0E4 1043 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 OR8D2Q9GZM6 311 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 KCNE5Q9UJ90 142 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 COL5A1P20908 1838 aaPredicted RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 GDF9O60383 454 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 UGT2B11O75310 529 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 ATP6V1B1P15313 513 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 ACP1P24666 158 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 EPHA2P29317 976 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 TRHRP34981 398 aaPredicted RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 SMIM11AP58511 58 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 EEF1A1P68104 462 aaKnown RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 HOXC5Q00444 222 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 SEC23BQ15437 767 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 ELAVL1Q15717 326 aaKnown RBP16.82■□□□□ 0.28
SMC4-211ENST00000469858 NKAIN1Q4KMZ8 207 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 FLYWCH1Q4VC44 716 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 LIN52Q52LA3 116 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 EIPR1Q53HC9 387 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 THAP5Q7Z6K1 395 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 STT3BQ8TCJ2 826 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 GTPBP3Q969Y2 492 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms