RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PIK3IP1Q96FE7 263 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 PANX3Q96QZ0 392 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 SLC39A3Q9BRY0 314 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 CARD6Q9BX69 1037 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 ESRP2Q9H6T0 727 aaKnown RBP4.24□□□□□ -1.73
VPS8-219ENST00000469479 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 NLE1Q9NVX2 485 aaPredicted RBP4.24□□□□□ -1.73
VPS8-219ENST00000469479 CHMP5Q9NZZ3 219 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 NKX1-2Q9UD57 310 aaPredicted RBP4.24□□□□□ -1.73
VPS8-219ENST00000469479 PCYOX1Q9UHG3 505 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 RSPH14Q9UHP6 348 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 FBXW2Q9UKT8 454 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 TTC7AQ9ULT0 858 aaPredicted RBP4.24□□□□□ -1.73
VPS8-219ENST00000469479 SIRT4Q9Y6E7 314 aaPredicted RBP4.24□□□□□ -1.73
VPS8-219ENST00000469479 ABCA1O95477 2261 aa4.24□□□□□ -1.73
VPS8-219ENST00000469479 SCN2AQ99250 2005 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 C15orf38-AP3S2A0A0A6YYH1 394 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 C3orf70A6NLC5 250 aaPredicted RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 LGALS16A8MUM7 142 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 HACD1B0YJ81 288 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 UBFD1O14562 309 aaKnown RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 RRHO14718 337 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 HS3ST1O14792 307 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 EPHB6O15197 1021 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 TCF21O43680 179 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 LDB3O75112 727 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 OR2J2O76002 312 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 PROSCO94903 275 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 C1orf105O95561 183 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ERGP11308 486 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 CHMP24386 653 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 PSMB5P28074 263 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 FOXN2P32314 431 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 GJC1P36383 396 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 RPL21P46778 160 aaKnown RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 EIF3BP55884 814 aaKnown RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 KCNJ2P63252 427 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 WASHC5Q12768 1159 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 FGFBP1Q14512 234 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 PTPRCAPQ14761 206 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 NRF1Q16656 503 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 KRT71Q3SY84 523 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ANKRD20A4Q4UJ75 823 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 BEX5Q5H9J7 111 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ANKRD20A2Q5SQ80 823 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ANKRD20A1Q5TYW2 823 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ANKRD20A3Q5VUR7 823 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 IL20RBQ6UXL0 311 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 PID1Q7Z2X4 250 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ADCK2Q7Z695 626 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 LRRC6Q86X45 466 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 RASGEF1CQ8N431 466 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 TBC1D19Q8N5T2 526 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 LRRC17Q8N6Y2 441 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 C3orf56Q8N813 242 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 APCDD1LQ8NCL9 501 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 NFAM1Q8NET5 270 aaPredicted RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 OR5L2Q8NGL0 311 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ZPLD1Q8TCW7 415 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 STYXQ8WUJ0 223 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 SKA2Q8WVK7 121 aaPredicted RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 TSLPQ969D9 159 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 MSI2Q96DH6 328 aaKnown RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 DTNBP1Q96EV8 351 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 OXNAD1Q96HP4 312 aaPredicted RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 ART5Q96L15 291 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 LRGUKQ96M69 825 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 IL17FQ96PD4 163 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ERGIC2Q96RQ1 377 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 RHNO1Q9BSD3 238 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 GBA3Q9H227 469 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 FAM96AQ9H5X1 160 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 FANCFQ9NPI8 374 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 HIF1ANQ9NWT6 349 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 TAB2Q9NYJ8 693 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 CNIH4Q9P003 139 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 STOX2Q9P2F5 926 aaPredicted RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 SPRR3Q9UBC9 169 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 MMACHCQ9Y4U1 282 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS8-219ENST00000469479 LIPGQ9Y5X9 500 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 BZW2Q9Y6E2 419 aaKnown RBP4.23□□□□□ -1.73
VPS8-219ENST00000469479 COMMD10Q9Y6G5 202 aa4.23□□□□□ -1.73
VPS8-219ENST00000469479 ZNF407Q9C0G0 2248 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 IGKV3D-11A0A0A0MRZ8 115 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 A0A1W2PPV9 198 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 URADA6NGE7 173 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 A8MXE2 369 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 C16orf97H3BN30 126 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 SGK494L7N484 410 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 P2RX6O15547 441 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 B4GALT2O60909 372 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 RDH16O75452 317 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 OR6B1O95007 311 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 RCBTB2O95199 551 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 GAS8O95995 478 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 ACTL6AO96019 429 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 AGTP01019 485 aa4.22□□□□□ -1.73
VPS8-219ENST00000469479 CATP04040 527 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms