RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TXNL4BQ9NX01 149 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 NKIRAS2Q9NYR9 191 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 VSX1Q9NZR4 365 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CALML5Q9NZT1 146 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FBXL3Q9UKT7 428 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CLCA2Q9UQC9 943 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CA5BQ9Y2D0 317 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 DLGAP4Q9Y2H0 992 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 POMT1Q9Y6A1 747 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF638Q14966 1978 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FNDC1Q4ZHG4 1894 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF646O15015 1829 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 QSER1Q2KHR3 1735 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GREB1LQ9C091 1923 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 A0A0U1RQF3 1178 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 A0A0U1RQS6 177 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 A0A1W2PRB8 838 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 UBE2QL1A1L167 161 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR6C74A6NCV1 312 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ASPDHA6ND91 283 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 M0QZK8 103 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RFXAPO00287 272 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 WWP2O00308 870 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 GSTZ1O43708 216 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MAFKO60675 156 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PEX10O60683 326 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 KERAO60938 352 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 AP2A2O94973 939 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OAZ2O95190 189 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SIX3O95343 332 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ARIH2O95376 493 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 IFNA17P01571 189 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TFP02787 698 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SEMG1P04279 462 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 HIST1H2ABP04908 130 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 GLAP06280 429 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 LPLP06858 475 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 THP07101 528 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SPP1P10451 314 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PRPS2P11908 318 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RNH1P13489 461 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ERCC2P18074 760 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ANXA7P20073 488 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 NPR2P20594 1047 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CNR1P21554 472 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 S100A2P29034 98 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 GRK5P34947 590 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TGFBR1P36897 503 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CDKN2CP42773 168 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 BDKRB1P46663 353 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZFP36L2P47974 494 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PITPNBP48739 271 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RGS19P49795 217 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MMP15P51511 669 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MECP2P51608 486 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SUOXP51687 545 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 DLX5P56178 289 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 C21orf58P58505 322 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SMIM11AP58511 58 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SLC26A5P58743 744 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 LINC00310P59036 64 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TAS2R39P59534 338 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 HNRNPKP61978 463 aaKnown RBP eCLIP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RPS8P62241 208 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 BDH1Q02338 343 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ACSM1Q08AH1 577 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CNTN1Q12860 1018 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 BAATQ14032 418 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 LRRC32Q14392 662 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF345Q14585 488 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 HLXQ14774 488 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PEA15Q15121 130 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SSX1Q16384 188 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 GSG1Q2KHT4 349 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 KRBOX4Q5JUW0 171 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 C6orf136Q5SQH8 315 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ATAT1Q5SQI0 421 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RIPPLY2Q5TAB7 128 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SUSD4Q5VX71 490 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR6B2Q6IFH4 312 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CD200R1LQ6Q8B3 271 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SUSD1Q6UWL2 747 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 VITQ6UXI7 678 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 DEF8Q6ZN54 512 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 QSOX2Q6ZRP7 698 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MOB3CQ70IA8 216 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 GAREM2Q75VX8 874 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 HIST3H2AQ7L7L0 130 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MAMDC2Q7Z304 686 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ABI3BPQ7Z7G0 1075 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PEG10Q86TG7 708 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PAQR7Q86WK9 346 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 METTL23Q86XA0 190 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MISPQ8IVT2 679 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF567Q8N184 647 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CARFQ8N187 725 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CPXM2Q8N436 756 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TOMM5Q8N4H5 51 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 FAM98AQ8NCA5 519 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms