RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FBXO34Q9NWN3 711 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 AKAP7Q9P0M2 348 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 TMEFF2Q9UIK5 374 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 KCND3Q9UK17 655 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 NINQ8N4C6 2090 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 COL5A1P20908 1838 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 IGLV3-12A0A075B6K2 115 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 SYNDIG1LA6NDD5 238 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 FFAR1O14842 300 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 KIAA0513O60268 411 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 DBIP07108 87 aaKnown RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 CCL4P13236 92 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 TRHRP34981 398 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 HMGA2P52926 109 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 ADARB1P78563 741 aaKnown RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 MC2RQ01718 297 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 OVCH1Q7RTY7 1134 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 GALNT5Q7Z7M9 940 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 BMPERQ8N8U9 685 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 OR6T1Q8NGN1 323 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 DAZLQ92904 295 aaKnown RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 NMNAT1Q9HAN9 279 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 OR10H1Q9Y4A9 318 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 PCDHGB5Q9Y5G0 923 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 NUP210LQ5VU65 1888 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 FER1L5A0AVI2 2057 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 GDF9O60383 454 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 CPNE3O75131 537 aaKnown RBP17.6■□□□□ 0.41
SMC4-209ENST00000468653 CLPSP04118 112 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 H1F0P07305 194 aaKnown RBP17.6■□□□□ 0.41
SMC4-209ENST00000468653 HEXBP07686 556 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 THBS1P07996 1170 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 GNAO1P09471 354 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 SMIM11AP58511 58 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 MICAQ29983 383 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 LIN52Q52LA3 116 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 EIPR1Q53HC9 387 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 KDM4DQ6B0I6 523 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 NPSR1Q6W5P4 371 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 CLIP4Q8N3C7 705 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 OR10G2Q8NGC3 310 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 OR4N2Q8NGD1 307 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 OR14A16Q8NHC5 309 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 SLC2A12Q8TD20 617 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 ART5Q96L15 291 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 MBOAT4Q96T53 435 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 ARHGDIGQ99819 225 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 ITPAQ9BY32 194 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 FBXO8Q9NRD0 319 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 HCN4Q9Y3Q4 1203 aa17.6■□□□□ 0.41
SMC4-209ENST00000468653 NPIPA5A0A0B4J1W7 369 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 NPIPA7E9PJI5 369 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 MITFO75030 526 aaPredicted RBP17.59■□□□□ 0.41
SMC4-209ENST00000468653 CCNB2O95067 398 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 ONECUT2O95948 504 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 NPIPA8P0DM63 369 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 CDH2P19022 906 aaPredicted RBP17.59■□□□□ 0.41
SMC4-209ENST00000468653 AGXTP21549 392 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 MYF6P23409 242 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 CCKBRP32239 447 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 SLC37A1P57057 533 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 KCNAB2Q13303 367 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 NNATQ16517 81 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 FLYWCH1Q4VC44 716 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 FGD3Q5JSP0 725 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 TTC23Q5W5X9 447 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 ZNF385CQ66K41 422 aaPredicted RBP17.59■□□□□ 0.41
SMC4-209ENST00000468653 FAAH2Q6GMR7 532 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 FAHD1Q6P587 224 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 ZNF836Q6ZNA1 936 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 ZNF321PQ8N8H1 164 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 ALPK1Q96QP1 1244 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 CMKLR1Q99788 373 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 FNDC11Q9BVV2 318 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 KRT84Q9NSB2 600 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 RLIMQ9NVW2 624 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 FAM118AQ9NWS6 357 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 TMCC3Q9ULS5 477 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 CFL2Q9Y281 166 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 GPR55Q9Y2T6 319 aaPredicted RBP17.59■□□□□ 0.41
SMC4-209ENST00000468653 FRYLO94915 3013 aa17.59■□□□□ 0.41
SMC4-209ENST00000468653 MEN1O00255 615 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 PEX12O00623 359 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 PCDH17O14917 1159 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 SEMA7AO75326 666 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 UGT2B17O75795 530 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 CLIC3O95833 236 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 DDAH2O95865 285 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 CT45A8P0DMV1 189 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 CT45A9P0DMV2 189 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 RPS4Y1P22090 263 aaKnown RBP17.58■□□□□ 0.41
SMC4-209ENST00000468653 LIMS1P48059 325 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 PIN1Q13526 163 aaPredicted RBP17.58■□□□□ 0.41
SMC4-209ENST00000468653 CT45A2Q5DJT8 189 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 LANCL3Q6ZV70 420 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 SLC5A8Q8N695 610 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 ZNF721Q8TF20 911 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 FKBP10Q96AY3 582 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms