RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PROCRQ9UNN8 238 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF175Q9Y473 711 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 HEATR5AQ86XA9 2040 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 SEC14L5O43304 696 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 KLF4O43474 513 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 SCO2O43819 266 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 CRLF1O75462 422 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 RPS17P08708 135 aaKnown RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 RBP1P09455 135 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 NID1P14543 1247 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 TBXA2RP21731 343 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 MAGEA12P43365 314 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 CLDN20P56880 219 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 PSPHP78330 225 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 FGFBP1Q14512 234 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 PON3Q15166 354 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 UAP1Q16222 522 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF483Q8TF39 744 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 HBEGFQ99075 208 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 RTN4RQ9BZR6 473 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 KLHL4Q9C0H6 718 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 MED11Q9P086 117 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 MCM8Q9UJA3 840 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
PTPN7-207ENST00000468385 UTP11Q9Y3A2 253 aaKnown RBP11.76□□□□□ -0.53
PTPN7-207ENST00000468385 RTTNQ86VV8 2226 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 OR2M5A3KFT3 312 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 H3BML4 177 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 FADS1O60427 444 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 SMIM24O75264 130 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 SOX30O94993 753 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 ESRRBO95718 433 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 OTCP00480 354 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 PLAUP00749 431 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 IL3P08700 152 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 TSPAN8P19075 237 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 CDH13P55290 713 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 RAE1P78406 368 aaKnown RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 PSG6Q00889 435 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 OCRLQ01968 901 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 GANABQ14697 944 aaKnown RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 BEX5Q5H9J7 111 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 TCHHL1Q5QJ38 904 aaPredicted RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 UBAP2Q5T6F2 1119 aaKnown RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF704Q6ZNC4 412 aaPredicted RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 SH2D5Q6ZV89 423 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 METTL25Q8N6Q8 603 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 OR7G2Q8NG99 324 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 UHMK1Q8TAS1 419 aaKnown RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 EXOSC8Q96B26 276 aaKnown RBP11.75□□□□□ -0.53
PTPN7-207ENST00000468385 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 NMRK1Q9NWW6 199 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 FLRT3Q9NZU0 649 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 VPS29Q9UBQ0 182 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 SNX6Q9UNH7 406 aa11.75□□□□□ -0.53
PTPN7-207ENST00000468385 LINC01387J3KSC0 135 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 PLOD3O60568 738 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 TMCC2O75069 709 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 AQP8O94778 261 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 CHN1P15882 459 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 NR1H2P55055 460 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 MRPS22P82650 360 aaKnown RBP11.74□□□□□ -0.53
PTPN7-207ENST00000468385 STX5Q13190 355 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 TNK1Q13470 666 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 EXOC3L2Q2M3D2 409 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 C1GALT1C1Q96EU7 318 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 TMEM204Q9BSN7 226 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 C1QTNF3Q9BXJ4 246 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 RAB17Q9H0T7 212 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 PLSCR4Q9NRQ2 329 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 TAS2R9Q9NYW1 312 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
PTPN7-207ENST00000468385 PCDH7O60245 1069 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 OR4F21O95013 312 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 SBK3P0C264 359 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 HSD3B1P14060 373 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 PPP3CBP16298 524 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 HSD3B2P26439 372 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 SLC6A8P48029 635 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 ATP5J2P56134 94 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 RPS3AP61247 264 aaKnown RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF155Q12901 538 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 GGNQ86UU5 652 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 SAMD14Q8IZD0 417 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 FAM9CQ8IZT9 166 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 TMEM151AQ8N4L1 468 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 OR6K3Q8NGY3 331 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 C16orf78Q8WTQ4 265 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 DUSP19Q8WTR2 217 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms