RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 GFAPP14136 432 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 IL12BP29460 328 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
LINC00888-201ENST00000468380 GALNT1Q10472 559 aaPredicted RBP16.7■□□□□ 0.26
LINC00888-201ENST00000468380 GRTP1Q5TC63 336 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 FRG2Q64ET8 278 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 PAGE2Q7Z2X7 111 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 COMMD6Q7Z4G1 85 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 GGNQ86UU5 652 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 SMAP2Q8WU79 429 aaPredicted RBP16.7■□□□□ 0.26
LINC00888-201ENST00000468380 FRG2BQ96QU4 278 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 FARSBQ9NSD9 589 aaKnown RBP16.7■□□□□ 0.26
LINC00888-201ENST00000468380 AHSPQ9NZD4 102 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 WHRNQ9P202 907 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
LINC00888-201ENST00000468380 SNX24Q9Y343 169 aa16.7■□□□□ 0.26
LINC00888-201ENST00000468380 SVEP1Q4LDE5 3571 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 SHISA8B8ZZ34 492 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 FADS1O60427 444 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 CRABP2P29373 138 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 EVI2BP34910 448 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 SGCBQ16585 318 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 PGGHGQ32M88 737 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 SGO1Q5FBB7 561 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 C3orf62Q6ZUJ4 267 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 ATG4DQ86TL0 474 aaPredicted RBP16.69■□□□□ 0.26
LINC00888-201ENST00000468380 CTAGE3PQ8IX95 158 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 ZNF675Q8TD23 568 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 FBXW5Q969U6 566 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 GTPBP3Q969Y2 492 aaKnown RBP16.69■□□□□ 0.26
LINC00888-201ENST00000468380 FOLH1BQ9HBA9 442 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 ZBTB26Q9HCK0 441 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 PSME2Q9UL46 239 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 GPR52Q9Y2T5 361 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 EMC9Q9Y3B6 208 aa16.69■□□□□ 0.26
LINC00888-201ENST00000468380 A0A096LNT2 108 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 LINC01387J3KSC0 135 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 CLOCKO15516 846 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 SS18L1O75177 396 aaPredicted RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 GUCY1B2O75343 617 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 CD8AP01732 235 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 RPS3AP61247 264 aaKnown RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 SRSF2Q01130 221 aaKnown RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 FAPQ12884 760 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 STX5Q13190 355 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 TMEM44Q2T9K0 475 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 NCMAPQ5T1S8 102 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 SLC44A2Q8IWA5 706 aaPredicted RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 OR9A2Q8NGT5 310 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 DUSP19Q8WTR2 217 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 C1GALT1C1Q96EU7 318 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 GMPPAQ96IJ6 420 aaPredicted RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 GPR78Q96P69 363 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 NTMT1Q9BV86 223 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 STMN4Q9H169 189 aaPredicted RBP16.68■□□□□ 0.26
LINC00888-201ENST00000468380 RNF115Q9Y4L5 304 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 AP4B1Q9Y6B7 739 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 ZNF780BQ9Y6R6 833 aa16.68■□□□□ 0.26
LINC00888-201ENST00000468380 PSMB1P20618 241 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 KRT20P35900 424 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 TRAF3Q13114 568 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 TSC22D1Q15714 1073 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 PPP4R4Q6NUP7 873 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 BEND4Q6ZU67 534 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 PPM1NQ8N819 430 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 GFM2Q969S9 779 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 ATP6V1E2Q96A05 226 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 S100PBPQ96BU1 408 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 NSUN5Q96P11 429 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 OR10A4Q9H209 315 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 CPSF2Q9P2I0 782 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 UTS2RQ9UKP6 389 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 SLC12A4Q9UP95 1085 aa16.67■□□□□ 0.26
LINC00888-201ENST00000468380 YLPM1P49750 1951 aaKnown RBP16.67■□□□□ 0.26
LINC00888-201ENST00000468380 IGHV4-30-2A0A087WSY4 118 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 BCAS2O75934 225 aaPredicted RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 OPN1LWP04000 364 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 ALDOAP04075 364 aaKnown RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 C2P06681 752 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 FCGR2AP12318 317 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 EIF1AXP47813 144 aaKnown RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 CCNG1P51959 295 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 CTBP2P56545 445 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 MRPS25P82663 173 aaKnown RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 PSG6Q00889 435 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 ACAP2Q15057 778 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 ZNF672Q499Z4 452 aaPredicted RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 GLYR1Q49A26 553 aaPredicted RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 TTC19Q6DKK2 380 aaPredicted RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 MFSD12Q6NUT3 480 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 MARCH3Q86UD3 253 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 C19orf24Q9BVV8 132 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 PRRG4Q9BZD6 226 aa16.66■□□□□ 0.26
LINC00888-201ENST00000468380 CDC42EP3Q9UKI2 254 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms