RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-208	ENST00000467838	LOC102723532	A0A0G2JNH3	316 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	C7orf66	A4D0T2	115 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ISM1	B1AKI9	464 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	RGS9	O75916	674 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	GNS	P15586	552 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	PSMB5	P28074	263 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	EVI2B	P34910	448 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	OR3A3	P47888	321 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ATP12A	P54707	1039 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	CSNK1G2	P78368	415 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SHC2	P98077	582 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ST3GAL3	Q11203	375 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ZNF791	Q3KP31	576 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	TMEM35A	Q53FP2	167 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	HBM	Q6B0K9	141 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SIGIRR	Q6IA17	410 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	TMEM107	Q6UX40	140 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ERN2	Q76MJ5	926 aa	Known RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SZRD1	Q7Z422	152 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	LRRC28	Q86X40	367 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	MEX3D	Q86XN8	651 aa	Known RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ZNF366	Q8N895	744 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	TMIE	Q8NEW7	156 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	OR5M3	Q8NGP4	307 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	MKRN2	Q9H000	416 aa	Known RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SLC38A1	Q9H2H9	487 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	TBC1D17	Q9HA65	648 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	SLC28A3	Q9HAS3	691 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	GALNT9	Q9HCQ5	603 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	POLM	Q9NP87	494 aa	Predicted RBP	13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	CTPS2	Q9NRF8	586 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838	CHST2	Q9Y4C5	530 aa		13.59	□□□□□ -0.23
SEC16A-208	ENST00000467838		H7BY64	318 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	GTPBP1	O00178	669 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	AKR7A2	O43488	359 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	PLOD3	O60568	738 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	HMGN2	P05204	90 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ELK1	P19419	428 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CTBP2	P56545	445 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	MAP4K2	Q12851	820 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	GPR176	Q14439	515 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	LASP1	Q14847	261 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	TMEM52B	Q4KMG9	183 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	BICRAL	Q6AI39	1079 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	MRM1	Q6IN84	353 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	SMARCD3	Q6STE5	483 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ADAMTSL4	Q6UY14	1074 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	AMZ2	Q86W34	360 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	NR2C2AP	Q86WQ0	139 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	MARVELD3	Q96A59	401 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRAP1	Q96NZ9	151 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	NRTN	Q99748	197 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	TEX12	Q9BXU0	123 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	KCNN2	Q9H2S1	579 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	PIGU	Q9H490	435 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	B3GNT2	Q9NY97	397 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	WNT6	Q9Y6F9	365 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	LRIT2	A6NDA9	550 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR1F1	O43749	312 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CRYZL1	O95825	349 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ADH1A	P07327	375 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CD53	P19397	219 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	RBMS1	P29558	406 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRKAR1B	P31321	381 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	SSR2	P43308	183 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	RFX3	P48380	749 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	RNF144A	P50876	292 aa	Predicted RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ANGPT1	Q15389	498 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZIC1	Q15915	447 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZNF311	Q5JNZ3	666 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CLEC12A	Q5QGZ9	265 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	HACD4	Q5VWC8	232 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	KIAA1161	Q6NSJ0	714 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC30A6	Q6NXT4	461 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	TOR1AIP2	Q8NFQ8	470 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	TTL	Q8NG68	377 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	SECISBP2	Q96T21	854 aa	Known RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CALML5	Q9NZT1	146 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	EXTL2	Q9UBQ6	330 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	ENTPD4	Q9Y227	616 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	NOTCH4	Q99466	2003 aa		13.58	□□□□□ -0.24
SEC16A-208	ENST00000467838	CD8B2	A6NJW9	211 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	RNF13	O43567	381 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	LCMT2	O60294	686 aa	Known RBP	13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	CD8B	P10966	210 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	ADRB3	P13945	408 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	BTC	P35070	178 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	THBS2	P35442	1172 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	INPP1	P49441	399 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	INSL4	Q14641	139 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	CEBPE	Q15744	281 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	ARHGAP15	Q53QZ3	475 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	C6orf132	Q5T0Z8	1188 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZNF697	Q5TEC3	545 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	METRNL	Q641Q3	311 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms