RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TMEM107Q6UX40 140 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 CCNYL1Q8N7R7 359 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 CNEP1R1Q8N9A8 125 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 C11orf24Q96F05 449 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-207ENST00000467819 GSTO2Q9H4Y5 243 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 MID1IP1Q9NPA3 183 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 NDRG3Q9UGV2 375 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 HK1P19367 917 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 FOXA1P55317 472 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 EEF1A1P68104 462 aaKnown RBP19.04■□□□□ 0.64
COL9A3-207ENST00000467819 BCL2A1Q16548 175 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 IMPG1Q17R60 797 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 EEF1A1P5Q5VTE0 462 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 RAET1LQ5VY80 246 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 FADS6Q8N9I5 356 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 OR2M3Q8NG83 312 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 NEUROD4Q9HD90 331 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 MIEF1Q9NQG6 463 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 FLRT3Q9NZU0 649 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 MED11Q9P086 117 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 EIF3LQ9Y262 564 aaKnown RBP19.04■□□□□ 0.64
COL9A3-207ENST00000467819 ARID1AO14497 2285 aa19.04■□□□□ 0.64
COL9A3-207ENST00000467819 HEATR5AQ86XA9 2040 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 SLC22A20A6NK97 555 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 MYO1GB0I1T2 1018 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 RIPK2O43353 540 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 PYGBP11216 843 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 PEPDP12955 493 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 FOSL1P15407 271 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 CD53P19397 219 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 GSTM5P46439 218 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 FAM27E3Q08E93 113 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 VWA1Q6PCB0 445 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 TRMT10CQ7L0Y3 403 aaKnown RBP19.03■□□□□ 0.64
COL9A3-207ENST00000467819 MEIOBQ8N635 442 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 SMPDL3BQ92485 455 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 SHCBP1LQ9BZQ2 653 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 TESMINQ9Y4I5 508 aa19.03■□□□□ 0.64
COL9A3-207ENST00000467819 POLR3HQ9Y535 204 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-207ENST00000467819 H0YC42 278 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 UBFD1O14562 309 aaKnown RBP19.02■□□□□ 0.64
COL9A3-207ENST00000467819 MSTNO14793 375 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 SEC14L5O43304 696 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 NTSP30990 170 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 RFX3P48380 749 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 TPD52P55327 224 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-207ENST00000467819 SIRPAP78324 504 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 OR2A2Q6IF42 318 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 OR5M1Q8NGP8 315 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 ACMSDQ8TDX5 336 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 FIG4Q92562 907 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 STARD4Q96DR4 205 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 FAM111AQ96PZ2 611 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 RTN4RQ9BZR6 473 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 DDX18Q9NVP1 670 aaKnown RBP19.02■□□□□ 0.64
COL9A3-207ENST00000467819 SIRT5Q9NXA8 310 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 C6orf203Q9P0P8 240 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-207ENST00000467819 TBK1Q9UHD2 729 aa19.02■□□□□ 0.64
COL9A3-207ENST00000467819 C19orf53Q9UNZ5 99 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-207ENST00000467819 A0A087WV62 115 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 SERTM1A2A2V5 107 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 UPK1AO00322 258 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 FADS1O60427 444 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 CRHP06850 196 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 GSTA1P08263 222 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 HOXC12P31275 282 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 DECR1Q16698 335 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 CYP27C1Q4G0S4 372 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 FAM71E1Q6IPT2 247 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 PGM2Q96G03 612 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 PINK1Q9BXM7 581 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 OPN3Q9H1Y3 402 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-207ENST00000467819 GLIPR2Q9H4G4 154 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 Q9N2J8 555 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 MYNNQ9NPC7 610 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 SDHAF3Q9NRP4 125 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 BEX4Q9NWD9 120 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-207ENST00000467819 KLHL28Q9NXS3 571 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 PSMC3IPQ9P2W1 217 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-207ENST00000467819 EMCNQ9ULC0 261 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 GRID1Q9ULK0 1009 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 ABCG2Q9UNQ0 655 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 ZNF337Q9Y3M9 751 aa19.01■□□□□ 0.63
COL9A3-207ENST00000467819 NSD1Q96L73 2696 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-207ENST00000467819 H3BML4 177 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 CRCPO75575 148 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 MYL2P10916 166 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 SUCLG1P53597 346 aaKnown RBP19■□□□□ 0.63
COL9A3-207ENST00000467819 CLDN15P56746 228 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 GANABQ14697 944 aaKnown RBP19■□□□□ 0.63
COL9A3-207ENST00000467819 ZNHIT3Q15649 155 aaPredicted RBP19■□□□□ 0.63
COL9A3-207ENST00000467819 BTLAQ7Z6A9 289 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 MARCH3Q86UD3 253 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 AMDHD1Q96NU7 426 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 WFIKKN1Q96NZ8 548 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 SMR3AQ99954 134 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 PTGES2Q9H7Z7 377 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 FAM120CQ9NX05 1096 aaKnown RBP19■□□□□ 0.63
COL9A3-207ENST00000467819 DSCAMO60469 2012 aa19■□□□□ 0.63
COL9A3-207ENST00000467819 OR2M5A3KFT3 312 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms