RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 P4HA3Q7Z4N8 544 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 MZB1Q8WU39 189 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 PLEKHF2Q9H8W4 249 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 POLR3HQ9Y535 204 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-206ENST00000466532 FLNAP21333 2647 aaKnown RBP17.34■□□□□ 0.37
COL9A3-206ENST00000466532 HEATR5AQ86XA9 2040 aa17.33■□□□□ 0.37
COL9A3-206ENST00000466532 A0A087WV62 115 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 SH3D21A4FU49 640 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 G3V2L1 256 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 SLITRK5O94991 958 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 TGM6O95932 706 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 B3GALT5-AS1P59052 145 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 FAM71E1Q6IPT2 247 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 ZYG11AQ6WRX3 759 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 CHMP1BQ7LBR1 199 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 UBQLNLQ8IYU4 475 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 CEP112Q8N8E3 955 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 FADS6Q8N9I5 356 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 DACH2Q96NX9 599 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 DSN1Q9H410 356 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 GLIPR2Q9H4G4 154 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 MYNNQ9NPC7 610 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 GRID1Q9ULK0 1009 aa17.33■□□□□ 0.36
COL9A3-206ENST00000466532 C19orf53Q9UNZ5 99 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-206ENST00000466532 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 A0A1W2PNV4 684 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 A0A1W2PPM1 405 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 A8MXE2 369 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 FADS1O60427 444 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 GLRA3O75311 464 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 CRCPO75575 148 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 TNFSF13O75888 250 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 HRGP04196 525 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 PEPDP12955 493 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 HK1P19367 917 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 NTSP30990 170 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 CPOXP36551 454 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 STX5Q13190 355 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 BCL2A1Q16548 175 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 DEFB113Q30KQ7 82 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 CYP27C1Q4G0S4 372 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 RAET1LQ5VY80 246 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 CNPY4Q8N129 248 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 OR2M3Q8NG83 312 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL9A3-206ENST00000466532 TXLNGYQ9BZA5 131 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 SDHAF3Q9NRP4 125 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 DDX18Q9NVP1 670 aaKnown RBP17.32■□□□□ 0.36
COL9A3-206ENST00000466532 TAS2R7Q9NYW3 318 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 FLRT3Q9NZU0 649 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 MED11Q9P086 117 aa17.32■□□□□ 0.36
COL9A3-206ENST00000466532 H3BQF6 201 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 KIF2AO00139 706 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-206ENST00000466532 UPK1AO00322 258 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 RSL1D1O76021 490 aaKnown RBP17.31■□□□□ 0.36
COL9A3-206ENST00000466532 NAA20P61599 178 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 ADAM8P78325 824 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 ZNHIT3Q15649 155 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-206ENST00000466532 DECR1Q16698 335 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 OR2A2Q6IF42 318 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 FRMD7Q6ZUT3 714 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 TRIM46Q7Z4K8 759 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 OR2L13Q8N349 312 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 MEIOBQ8N635 442 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 KIF18AQ8NI77 898 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 FAM76AQ8TAV0 307 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 AMDHD1Q96NU7 426 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 RHOXF2Q9BQY4 288 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 Q9N2J8 555 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 RRAGDQ9NQL2 400 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-206ENST00000466532 NDRG3Q9UGV2 375 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 ABCG2Q9UNQ0 655 aa17.31■□□□□ 0.36
COL9A3-206ENST00000466532 SLC22A20A6NK97 555 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 MSTNO14793 375 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 CASKO14936 926 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 SMNDC1O75940 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL9A3-206ENST00000466532 PSMG1O95456 288 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 PROCP04070 461 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 CRHP06850 196 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 RFX3P48380 749 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 GANABQ14697 944 aaKnown RBP17.3■□□□□ 0.36
COL9A3-206ENST00000466532 CFAP157Q5JU67 520 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 NOXRED1Q6NXP6 359 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 IKBIPQ70UQ0 350 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 CNEP1R1Q8N9A8 125 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 SMPDL3BQ92485 455 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 ELP4Q96EB1 424 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 POM121Q96HA1 1249 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 RTN4RQ9BZR6 473 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 PTGES2Q9H7Z7 377 aa17.3■□□□□ 0.36
COL9A3-206ENST00000466532 FAM120CQ9NX05 1096 aaKnown RBP17.3■□□□□ 0.36
COL9A3-206ENST00000466532 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
COL9A3-206ENST00000466532 WBP11Q9Y2W2 641 aaKnown RBP17.3■□□□□ 0.36
COL9A3-206ENST00000466532 NIPBLQ6KC79 2804 aaeCLIP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 A0A1W2PPR1 153 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 SEC14L5O43304 696 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 IL33O95760 270 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 CLK3P49761 638 aaKnown RBP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms