RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 PRR19A6NJB7 356 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 CCNYL3P0C7X3 344 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 ALPPL2P10696 532 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 SLC2A2P11168 524 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 APEX1P27695 318 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 PTGER1P34995 402 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 SOX18P35713 384 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 BDH1Q02338 343 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 UAP1L1Q3KQV9 507 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 TIGD3Q6B0B8 471 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 HEPHL1Q6MZM0 1159 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 ZNF620Q6ZNG0 422 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 SHFQ7M4L6 423 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 PEX5LQ8IYB4 626 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 Q8N402 240 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 DNAJA4Q8WW22 397 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 SMG7Q92540 1137 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 ZFYVE19Q96K21 471 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 TMEM246Q9BRR3 403 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 WDR26Q9H7D7 661 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 KLHL28Q9NXS3 571 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 NTMQ9P121 344 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 KLHL21Q9UJP4 597 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 GSAPA4D1B5 854 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 GABRPO00591 440 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 OR5F1O95221 314 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 SSTR4P31391 388 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 CAV3P56539 151 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 HOXC5Q00444 222 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 CLEC12AQ5QGZ9 265 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 C18orf63Q68DL7 685 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 MZT2BQ6NZ67 158 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 MZT2AQ6P582 158 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 PLET1Q6UQ28 207 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 MBOAT2Q6ZWT7 520 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 OR4F15Q8NGB8 312 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 DCLRE1CQ96SD1 692 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 TTYH2Q9BSA4 534 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 TRAF4Q9BUZ4 470 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 TRIM45Q9H8W5 580 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 MBNL1Q9NR56 388 aaKnown RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 THAP10Q9P2Z0 257 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF3-204ENST00000465659 J3QRE1 110 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 FRS3O43559 492 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 HPGDSO60760 199 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 ZIC2O95409 532 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 HMGN1P05114 100 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 MC3RP41968 323 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 ERVK-21P61565 698 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 FZD5Q13467 585 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 EOGTQ5NDL2 527 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 AGBL4Q5VU57 503 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 TRIQKQ629K1 86 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 VASNQ6EMK4 673 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 THOC7Q6I9Y2 204 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 SLC30A6Q6NXT4 461 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 MARCH9Q86YJ5 346 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 NKAIN4Q8IVV8 208 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 ZFP41Q8N8Y5 198 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 OR2L3Q8NG85 312 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 NEIL3Q8TAT5 605 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 KLK6Q92876 244 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 FYTTD1Q96QD9 318 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 MACROD1Q9BQ69 325 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 TMEM43Q9BTV4 400 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 PAQR5Q9NXK6 330 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 CBLCQ9ULV8 474 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 CDH10Q9Y6N8 788 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 MDC1Q14676 2089 aaKnown RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 A0A1W2PS29 197 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 SMIM30A4D0T7 59 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 SGK494L7N484 410 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 CSF2P04141 144 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 THY1P04216 161 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 C8orf89P0DMQ9 161 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 ALAS2P22557 587 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 CERS1P27544 350 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 C16orf62Q7Z3J2 963 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 GDF7Q7Z4P5 450 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 MFSD9Q8NBP5 474 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 OR9A2Q8NGT5 310 aa11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 SENP5Q96HI0 755 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF3-204ENST00000465659 IMP3Q9NV31 184 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms