RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 WDR91A4D1P6 747 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 RGS16O15492 202 aaPredicted RBP19.79■□□□□ 0.76
LIME1-203ENST00000465591 SCO2O43819 266 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 FADS1O60427 444 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 IGKV1D-16P01601 117 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 IFI6P09912 130 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 CEACAM8P31997 349 aaPredicted RBP19.79■□□□□ 0.76
LIME1-203ENST00000465591 EVI2BP34910 448 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 MAP3K8P41279 467 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 MPP2Q14168 576 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 RELL2Q8NC24 303 aaPredicted RBP19.79■□□□□ 0.76
LIME1-203ENST00000465591 OR14L1PQ8NHC6 308 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 HOXB13Q92826 284 aaPredicted RBP19.79■□□□□ 0.76
LIME1-203ENST00000465591 GIMAP5Q96F15 307 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 LURAP1Q96LR2 239 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 PPP3R2Q96LZ3 170 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 C1orf50Q9BV19 199 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 SPG11Q96JI7 2443 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 CTIFO43310 598 aaKnown RBP19.78■□□□□ 0.76
LIME1-203ENST00000465591 TCEA1P23193 301 aaKnown RBP19.78■□□□□ 0.76
LIME1-203ENST00000465591 SRD5A2P31213 254 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 GABRA3P34903 492 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 GPC1P35052 558 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 GFRA1P56159 465 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 DLX5P56178 289 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 PTGR1Q14914 329 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 TNFAIP8L3Q5GJ75 292 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 C6orf136Q5SQH8 315 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 POMZP3Q6PJE2 187 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 NUDCD3Q8IVD9 361 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 TRIM42Q8IWZ5 723 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 DMRTC2Q8IXT2 367 aaPredicted RBP19.78■□□□□ 0.76
LIME1-203ENST00000465591 PM20D2Q8IYS1 436 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 OR7A2PQ8NGA2 310 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 PIK3R3Q92569 461 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 C14orf79Q96F83 325 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 ZBED6CLQ96FA7 236 aaPredicted RBP19.78■□□□□ 0.76
LIME1-203ENST00000465591 ZIM3Q96PE6 472 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 Q9N2J8 555 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 TAS2R10Q9NYW0 307 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 NTMQ9P121 344 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 ATP6V1HQ9UI12 483 aa19.78■□□□□ 0.76
LIME1-203ENST00000465591 SCAMP2O15127 329 aaKnown RBP19.77■□□□□ 0.76
LIME1-203ENST00000465591 ZIC3O60481 467 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 ERLIN1O75477 346 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 IL33O95760 270 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 ACTL6AO96019 429 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 PRPS2P11908 318 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 SSTR2P30874 369 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 ASMTP46597 345 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 RFX3P48380 749 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 STARP49675 285 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 PRKAG1P54619 331 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 MANFP55145 182 aaKnown RBP19.77■□□□□ 0.76
LIME1-203ENST00000465591 DECR1Q16698 335 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 CEP85LQ5SZL2 805 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 NSUN5P2Q63ZY6 315 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 PLXDC2Q6UX71 529 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 LACC1Q8IV20 430 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 FADS6Q8N9I5 356 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 NUP43Q8NFH3 380 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 ZFP28Q8NHY6 868 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 FBXO30Q8TB52 745 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 TRIB1Q96RU8 372 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 G6PC3Q9BUM1 346 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 C20orf27Q9GZN8 174 aa19.77■□□□□ 0.76
LIME1-203ENST00000465591 SIRT3Q9NTG7 399 aaPredicted RBP19.77■□□□□ 0.76
LIME1-203ENST00000465591 ACSS1Q9NUB1 689 aaPredicted RBP19.77■□□□□ 0.76
LIME1-203ENST00000465591 ANKHD1Q8IWZ3 2542 aaKnown RBP19.77■□□□□ 0.76
LIME1-203ENST00000465591 MPDZO75970 2070 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 HSPB2A8KAH6 182 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 NKX2-2O95096 273 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 DHRS4L1P0CG22 281 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 ACP2P11117 423 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 LAMP1P11279 417 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 TIMP3P35625 211 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 ZNF136P52737 540 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 B3GALT5-AS1P59052 145 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 MRPS22P82650 360 aaKnown RBP19.76■□□□□ 0.75
LIME1-203ENST00000465591 TLE4Q04727 773 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 STX5Q13190 355 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 ZNHIT3Q15649 155 aaPredicted RBP19.76■□□□□ 0.75
LIME1-203ENST00000465591 CHI3L2Q15782 390 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 HSPB2Q16082 182 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 SLC25A35Q3KQZ1 300 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 ATP6AP1LQ52LC2 224 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 IL23RQ5VWK5 629 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 APOOLQ6UXV4 268 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 GALNT10Q86SR1 603 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 IFNEQ86WN2 208 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 KRTCAP2Q8N6L1 136 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 OR2M3Q8NG83 312 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 MTERF3Q96E29 417 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 RMND5BQ96G75 393 aaPredicted RBP19.76■□□□□ 0.75
LIME1-203ENST00000465591 C16orf58Q96GQ5 468 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 TUBA1CQ9BQE3 449 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 DSN1Q9H410 356 aa19.76■□□□□ 0.75
LIME1-203ENST00000465591 SSU72Q9NP77 194 aaKnown RBP19.76■□□□□ 0.75
LIME1-203ENST00000465591 RPH3AQ9Y2J0 694 aaPredicted RBP19.76■□□□□ 0.75
LIME1-203ENST00000465591 CD8B2A6NJW9 211 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms