RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 MRGBPQ9NV56 204 aa18.61■□□□□ 0.57
PTCD3-206ENST00000465560 TUBA8Q9NY65 449 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-206ENST00000465560 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
PTCD3-206ENST00000465560 PRAMEF25A6NGN4 478 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 HS6ST1O60243 411 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 TRIM3O75382 744 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 GLSO94925 669 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 KCNK2O95069 426 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 SNX4O95219 450 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 IGKV1D-16P01601 117 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 GSNP06396 782 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ZCCHC18P0CG32 403 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 CAPN3P20807 821 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 CHI3L1P36222 383 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 PTGDSP41222 190 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 RFX3P48380 749 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 SEC24CP53992 1094 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 RPS26P62854 115 aaKnown RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 GNGT1P63211 74 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 POU6F2P78424 691 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 PLGLB1Q02325 96 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ESPL1Q14674 2120 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 SLC30A6Q6NXT4 461 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 DNAJC14Q6Y2X3 702 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ZNF621Q6ZSS3 439 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ATCAYQ86WG3 371 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 SIAH3Q8IW03 269 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 GTF2H4Q92759 462 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ZNF597Q96LX8 424 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 OSBPL11Q9BXB4 747 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 FAM53CQ9NYF3 392 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 KLRF1Q9NZS2 232 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 BOKQ9UMX3 212 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-206ENST00000465560 PCDHGB3Q9Y5G1 929 aa18.6■□□□□ 0.57
PTCD3-206ENST00000465560 ZNF407Q9C0G0 2248 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 DUXAA6NLW8 204 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 ACOT7O00154 380 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 TFECO14948 347 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-206ENST00000465560 ICOSLGO75144 302 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 TRPC1P48995 793 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTCD3-206ENST00000465560 HYAL4Q2M3T9 481 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 C6orf10Q5SRN2 563 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 FIGNL1Q6PIW4 674 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 SLC2A7Q6PXP3 512 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 SLC22A16Q86VW1 577 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 ST6GALNAC3Q8NDV1 305 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 TMEM41AQ96HV5 264 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 PHF12Q96QT6 1004 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 NSRP1Q9H0G5 558 aaKnown RBP18.59■□□□□ 0.57
PTCD3-206ENST00000465560 ZFP64Q9NPA5 681 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 SLC6A13Q9NSD5 602 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 ABCG2Q9UNQ0 655 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 DNAJC13O75165 2243 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 GTF3C1Q12789 2109 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 RELNP78509 3460 aa18.59■□□□□ 0.57
PTCD3-206ENST00000465560 A0A1W2PP18 115 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 GMNCA6NCL1 334 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 LRRC3CA6NJW4 275 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 J3QKU1 62 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 ASNA1O43681 348 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 ANP32DO95626 131 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 CD1EP15812 388 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 PTPN6P29350 595 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 LCN1P31025 176 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 EVI2BP34910 448 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 PPIAP62937 165 aaKnown RBP18.58■□□□□ 0.56
PTCD3-206ENST00000465560 BNC2Q6ZN30 1099 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-206ENST00000465560 SPATA21Q7Z572 469 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 PACS2Q86VP3 889 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 ZFP90Q8TF47 636 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 GPR137Q96N19 417 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 G6PC3Q9BUM1 346 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 TSPAN10Q9H1Z9 355 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-206ENST00000465560 OR51I1Q9H343 314 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 GALNT9Q9HCQ5 603 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 SAR1AQ9NR31 198 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 FLRT3Q9NZU0 649 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 KCNE3Q9Y6H6 103 aa18.58■□□□□ 0.56
PTCD3-206ENST00000465560 A0A096LPI6 279 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 FAM166BA8MTA8 275 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 NPIPA5E9PKD4 350 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 UTS2O95399 124 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 CBX6O95503 412 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 AGR2O95994 175 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 C1QCP02747 245 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 DRD4P21917 467 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 MASP1P48740 699 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 KHKP50053 298 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 CASP9P55211 416 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 TXNL4AP83876 142 aaKnown RBP18.57■□□□□ 0.56
PTCD3-206ENST00000465560 DCST2Q5T1A1 773 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 CCNJQ5T5M9 372 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 FNDC7Q5VTL7 733 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 TNFAIP8L2Q6P589 184 aaPredicted RBP18.57■□□□□ 0.56
PTCD3-206ENST00000465560 ANGPTL8Q6UXH0 198 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 GALNT10Q86SR1 603 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 RNF130Q86XS8 419 aa18.57■□□□□ 0.56
PTCD3-206ENST00000465560 TMEM251Q8N6I4 163 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms