RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 EMBQ6PCB8 327 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 PLXDC2Q6UX71 529 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 ZFP28Q8NHY6 868 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 DTNBP1Q96EV8 351 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 FCRL1Q96LA6 429 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 TUBA1CQ9BQE3 449 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 REEP4Q9H6H4 257 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 L3MBTL1Q9Y468 752 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 TRAF6Q9Y4K3 522 aa17.51■□□□□ 0.39
CCHCR1-210ENST00000464012 MED12LQ86YW9 2145 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 MBD3L4A6NDZ8 208 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 MBD3L3A6NE82 208 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 MBD3L5A6NJ08 208 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CD8B2A6NJW9 211 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 B4DXG7 233 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 ZWINTO95229 277 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 SLU7O95391 586 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CAPN3P20807 821 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 EFNA1P20827 205 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 DPP4P27487 766 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 DGKQP52824 942 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 PRKAG1P54619 331 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 GFRA1P56159 465 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CYP27C1Q4G0S4 372 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CES4AQ5XG92 561 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 ARSKQ6UWY0 536 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 RNF165Q6ZSG1 346 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 ZZZ3Q8IYH5 903 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 C9orf106Q8NAJ2 232 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 MBD3L2Q8NHZ7 208 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 FBXO30Q8TB52 745 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 RNF138Q8WVD3 245 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 CAVIN3Q969G5 261 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 ROPN1BQ9BZX4 212 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 DSN1Q9H410 356 aa17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 ROPN1Q9HAT0 212 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 EML4Q9HC35 981 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-210ENST00000464012 GXYLT2A0PJZ3 443 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 EEF1E1-BLOC1S5C9J1V9 151 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 EEF1E1O43324 174 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 CPN1P15169 458 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 GABRA3P34903 492 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 MANFP55145 182 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 WDR93Q6P2C0 686 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 AAGABQ6PD74 315 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 GALNT10Q86SR1 603 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 ZPLD1Q8TCW7 415 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 PIK3R3Q92569 461 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 RMND5BQ96G75 393 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 SH3GL2Q99962 352 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 LMF2Q9BU23 707 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 CALHM2Q9HA72 323 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 SLC24A3Q9HC58 644 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 MRTO4Q9UKD2 239 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 TMED5Q9Y3A6 229 aa17.49■□□□□ 0.39
CCHCR1-210ENST00000464012 CLCA1A8K7I4 914 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 GMFGO60234 142 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 FADS1O60427 444 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 PEX11AO75192 247 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 IL33O95760 270 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 FGF4P08620 206 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 TMIGD3P0DMS9 266 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 PRPS2P11908 318 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 BCKDHAP12694 445 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 LHX2P50458 406 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 POMZP3Q6PJE2 187 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 NUP43Q8NFH3 380 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 GPR151Q8TDV0 419 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 SLC9A6Q92581 669 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 RNASE6Q93091 150 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 LRRC46Q96FV0 321 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 ZNF764Q96H86 408 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 C1orf50Q9BV19 199 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 RTN4RQ9BZR6 473 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 MED11Q9P086 117 aa17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 ZNF629Q9UEG4 869 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 ANKRD17O75179 2603 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-210ENST00000464012 TBX19O60806 448 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 KCNH1O95259 989 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 UTS2O95399 124 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 HK1P19367 917 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 CTSSP25774 331 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 ARRB2P32121 409 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 HPCAL1P37235 193 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 KIR2DL3P43628 341 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 ASMTP46597 345 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 PSMD4P55036 377 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 DSCR4P56555 118 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 PDE7AQ13946 482 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 KRT71Q3SY84 523 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 RAET1LQ5VY80 246 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 MARCH3Q86UD3 253 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 UBQLNLQ8IYU4 475 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 OR2M3Q8NG83 312 aa17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 OTUB1Q96FW1 271 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-210ENST00000464012 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms