RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 WRBO00258 174 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 RGS14O43566 566 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ITGA10O75578 1167 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 CFDP00746 253 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 TRBC1P01850 177 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 HLA-DPA1P20036 260 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 VLDLRP98155 873 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 TMEM52BQ4KMG9 183 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 DPPA4Q7L190 304 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 LIX1Q8N485 282 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 C7orf57Q8NEG2 295 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 TRIB3Q96RU7 358 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 SLC29A3Q9BZD2 475 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 FAM86C1Q9NVL1 165 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 POLR3HQ9Y535 204 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 VPS13AQ96RL7 3174 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ANKDD1BA6NHY2 528 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 LINC00587B1AMM8 73 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 HNRNPCL2B2RXH8 293 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 PDCD5O14737 125 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 SPINT1O43278 529 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 CSO75390 466 aaKnown RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 FGF1P05230 155 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 NMBP08949 121 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ELFN1P0C7U0 828 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 S100PP25815 95 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 VIPR1P32241 457 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 GPR143P51810 404 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ARHGEF7Q14155 803 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 GPR176Q14439 515 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 NR6A1Q15406 480 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 VMACQ2NL98 169 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 HES5Q5TA89 166 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 MRNIPQ6NTE8 343 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 CHMP1BQ7LBR1 199 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 EXT2Q93063 718 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 C7orf34Q96L11 122 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 AARSD1Q9BTE6 412 aaKnown RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 DPH7Q9BTV6 452 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 WRAP53Q9BUR4 548 aaKnown RBP10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 B4GALT6Q9UBX8 382 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 ACAD8Q9UKU7 415 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 SLC6A5Q9Y345 797 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 DMDP11532 3685 aa10.8□□□□□ -0.68
TRAPPC3-205ENST00000462715 LATO43561 262 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 SLC28A2O43868 658 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 AP2A2O94973 939 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 PTGER3P43115 390 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 STARP49675 285 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 ARHGDIBP52566 201 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 NUDT6P53370 316 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 PPP2CBP62714 309 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 PPP2CAP67775 309 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 TIAL1Q01085 375 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 SGCGQ13326 291 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 GPR68Q15743 365 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 MPEG1Q2M385 716 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 FAM174BQ3ZCQ3 159 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 CMIPQ8IY22 773 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 RGL4Q8IZJ4 473 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 OR52E6Q96RD3 313 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 MNTQ99583 582 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 ESRP2Q9H6T0 727 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 AMBNQ9NP70 447 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 NDOR1Q9UHB4 597 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 SPAG17Q6Q759 2223 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 NUMA1Q14980 2115 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 MYO15AQ9UKN7 3530 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 A0A1B0GTL3 188 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 D6RAR5 112 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 GPR171O14626 319 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 RAD1O60671 282 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 IGHV4-34P06331 123 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 ALPIP09923 528 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 CD27P26842 260 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 MAT2AP31153 395 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 HNF1BP35680 557 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 AGFG1P52594 562 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 IL18Q14116 193 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 LAPTM4AQ15012 233 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 LPAL2Q16609 132 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 CCDC157Q569K6 752 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 GLCCI1Q86VQ1 547 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 DMBX1Q8NFW5 382 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 OR10G2Q8NGC3 310 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 LCORQ96JN0 433 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 HSH2DQ96JZ2 352 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 LYSMD1Q96S90 227 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 YIPF4Q9BSR8 244 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 PDCD10Q9BUL8 212 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 KATNB1Q9BVA0 655 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 ZCCHC4Q9H5U6 513 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 KCTD5Q9NXV2 234 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 SUSD2Q9UGT4 822 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 RPL36Q9Y3U8 105 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 CCL27Q9Y4X3 112 aa10.79□□□□□ -0.68
TRAPPC3-205ENST00000462715 THADAQ6YHU6 1953 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms