RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TMCO3Q6UWJ1 677 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TRAPPC5Q8IUR0 188 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 FOXRED2Q8IWF2 684 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 DNAJC22Q8N4W6 341 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 ATPAF2Q8N5M1 289 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 RASGEF1AQ8N9B8 481 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 DDHD1Q8NEL9 900 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 ANKRD20A12PQ8NF67 263 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 OR4E2Q8NGC2 313 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 THAP6Q8TBB0 222 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 BRSK1Q8TDC3 778 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TEKT4Q8WW24 435 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TAAR8Q969N4 342 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 ZBTB9Q96C00 473 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 LINC00615Q96LM1 132 aaPredicted RBP4.42□□□□□ -1.7
COPS3-204ENST00000462236 C12orf66Q96MD2 445 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 GPR137Q96N19 417 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 ZNF285Q96NJ3 590 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 CSPG4P5Q96PW8 444 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 OR1F2PQ96R84 312 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 SMR3AQ99954 134 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TEX12Q9BXU0 123 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TRIM7Q9C029 511 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 WWP1Q9H0M0 922 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 LIME1Q9H400 295 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 TFB2MQ9H5Q4 396 aaKnown RBP4.42□□□□□ -1.7
COPS3-204ENST00000462236 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 MRM3Q9HC36 420 aaKnown RBP4.42□□□□□ -1.7
COPS3-204ENST00000462236 OR14J1Q9UGF5 321 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 PCSK1NQ9UHG2 260 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 SH3BGRL2Q9UJC5 107 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 PSMD13Q9UNM6 376 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 MRPS2Q9Y399 296 aaKnown RBP4.42□□□□□ -1.7
COPS3-204ENST00000462236 CMAHPQ9Y471 501 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 EXPH5Q8NEV8 1989 aa4.42□□□□□ -1.7
COPS3-204ENST00000462236 IGLV3-12A0A075B6K2 115 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 hCG_1807616A0A1W2PRN6 198 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 hDV102S1A0JD36 115 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 MGAT4DA6NG13 374 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 M0QZ24 198 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 SMAD9O15198 467 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 MFSD11O43934 449 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 CTAG2O75638 210 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 OR2B3O76000 313 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 SLCO2B1O94956 709 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 WDPCPO95876 746 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 HSP90AA1P07900 732 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 COX6A1P12074 109 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TCF4P15884 667 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 PORP16435 677 aaPredicted RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 HLA-DPA1P20036 260 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 CA4P22748 312 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 CCNCP24863 283 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 PSMA2P25787 234 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 BDKRB2P30411 391 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 SERPINB6P35237 376 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 PCK1P35558 622 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 HMGCLP35914 325 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 MTIF2P46199 727 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 ARSEP51690 589 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TUBA1BP68363 451 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 ARG2P78540 354 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 RBPJQ06330 500 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TRAF3Q13114 568 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 BECN1Q14457 450 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 PAFAH1B3Q15102 231 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 BCL7AQ4VC05 210 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 KRTCAP3Q53RY4 240 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 C1orf189Q5VU69 101 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 ALS2CLQ60I27 953 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 HIST2H2BDQ6DRA6 164 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TXNRD3NBQ6F5E7 133 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TMEM220Q6QAJ8 160 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 SPESP1Q6UW49 350 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 LINC00696Q6ZRV3 163 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 DOLPP1Q86YN1 238 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TTC30BQ8N4P2 665 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 MARVELD2Q8N4S9 558 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 ACVR1CQ8NER5 493 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 OR2L2Q8NH16 312 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 LILRB4Q8NHJ6 448 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 MARK4Q96L34 752 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 DACH2Q96NX9 599 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 ZNF385AQ96PM9 386 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 TRIM51Q9BSJ1 452 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TUBGCP2Q9BSJ2 902 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 OR52A5Q9H2C5 316 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 IL26Q9NPH9 171 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 IMP3Q9NV31 184 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 RBM22Q9NW64 420 aaKnown RBP eCLIP4.41□□□□□ -1.7
COPS3-204ENST00000462236 SMOXQ9NWM0 555 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TAS2R14Q9NYV8 317 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 SMARCAL1Q9NZC9 954 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 IL17CQ9P0M4 197 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 HOOK1Q9UJC3 728 aaKnown RBP4.41□□□□□ -1.7
COPS3-204ENST00000462236 ZNF711Q9Y462 761 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TTLL3Q9Y4R7 772 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms