RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GAB1Q13480 694 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 RCAN2Q14206 197 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 AAGABQ6PD74 315 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 KIF18BQ86Y91 864 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 C10orf107Q8IVU9 208 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 FADS6Q8N9I5 356 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 BANPQ8N9N5 519 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 OR14L1PQ8NHC6 308 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 FAM222BQ8WU58 562 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 EGLN2Q96KS0 407 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TRIB1Q96RU8 372 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TM9SF2Q99805 663 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TUBA1CQ9BQE3 449 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 LMF2Q9BU23 707 aaKnown RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 C12orf65Q9H3J6 166 aaKnown RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 LRTM1Q9HBL6 345 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 SDHAF3Q9NRP4 125 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 C1orf109Q9NX04 203 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 SENP1Q9P0U3 644 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 NTMQ9P121 344 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 FBXL2Q9UKC9 423 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 ITGB1BP2Q9UKP3 347 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 ABCG2Q9UNQ0 655 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 OR10H1Q9Y4A9 318 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 POLR3HQ9Y535 204 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 HIVEP1P15822 2718 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 FREM3P0C091 2139 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 LINC01387J3KSC0 135 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 HCRTR2O43614 444 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 NPHS1O60500 1241 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 IL33O95760 270 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 NEFHP12036 1026 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 ZNF708P17019 499 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DPP4P27487 766 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 IL12BP29460 328 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 NTSP30990 170 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DNAJA1P31689 397 aaKnown RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 UQCRC1P31930 480 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 FRKP42685 505 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 PCYT1AP49585 367 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 STARP49675 285 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DSCR4P56555 118 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CLDN18P56856 261 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 SORDQ00796 357 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 PDE7AQ13946 482 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 PCLAFQ15004 111 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DECR1Q16698 335 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 UGT3A2Q3SY77 523 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 GLYR1Q49A26 553 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 FLYWCH1Q4VC44 716 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CLEC6AQ6EIG7 209 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 TMEM107Q6UX40 140 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 TRABD2AQ86V40 505 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 IFNEQ86WN2 208 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 ZZZ3Q8IYH5 903 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 C4orf33Q8N1A6 199 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 RIBC1Q8N443 379 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CCDC63Q8NA47 563 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 OR2T11Q8NH01 316 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 NINJ1Q92982 152 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 EFHD2Q96C19 240 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 MTERF3Q96E29 417 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CCT7Q99832 543 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 SFXN3Q9BWM7 321 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 TUBB1Q9H4B7 451 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 REEP4Q9H6H4 257 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 ANKZF1Q9H8Y5 726 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 C3orf14Q9HBI5 128 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 Q9N2J8 555 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 RASSF1Q9NS23 344 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DDX18Q9NVP1 670 aaKnown RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 FAM120CQ9NX05 1096 aaKnown RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CRIM1Q9NZV1 1036 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CLCF1Q9UBD9 225 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 MRTO4Q9UKD2 239 aaKnown RBP8.3□□□□□ -1.08
BRCA1-207ENST00000461798 CBLCQ9ULV8 474 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 TMED5Q9Y3A6 229 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 DNAJC15Q9Y5T4 150 aa8.3□□□□□ -1.08
BRCA1-207ENST00000461798 IGLV3-32A0A0A0MS00 114 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 CLCA1A8K7I4 914 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 H0Y3Z8 333 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 NKX2-2O95096 273 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 GOSR1O95249 250 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 CRHP06850 196 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 TMIGD3P0DMS9 266 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 EPXP11678 715 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 PRPS2P11908 318 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 PEPDP12955 493 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 EVI2BP34910 448 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 PSMD4P55036 377 aaKnown RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 OCRLQ01968 901 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ZNF155Q12901 538 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 FOXF2Q12947 444 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms