RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 COQ8BQ96D53 544 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 MS4A4EQ96PG1 132 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 PNPOQ9NVS9 261 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 PCDHGB3Q9Y5G1 929 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 ENO4A6NNW6 628 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 IL33O95760 270 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 HOXD4P09016 255 aaPredicted RBP20.51■□□□□ 0.87
TRAF4-207ENST00000461195 GABRA1P14867 456 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 EVI2BP34910 448 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 CLDN8P56748 225 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 C21orf58P58505 322 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 PRR5P85299 388 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 PMPCAQ10713 525 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 CDSNQ15517 529 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 ZNF630Q2M218 657 aaPredicted RBP20.51■□□□□ 0.87
TRAF4-207ENST00000461195 EIPR1Q53HC9 387 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 PLCZ1Q86YW0 608 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 FAM83FQ8NEG4 500 aaPredicted RBP20.51■□□□□ 0.87
TRAF4-207ENST00000461195 GPR151Q8TDV0 419 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 OR5P2Q8WZ92 322 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 DTNBP1Q96EV8 351 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 GIMAP5Q96F15 307 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 NUF2Q9BZD4 464 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 CHST11Q9NPF2 352 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 SERHLQ9NQF3 203 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 SIRT3Q9NTG7 399 aaPredicted RBP20.51■□□□□ 0.87
TRAF4-207ENST00000461195 THAP1Q9NVV9 213 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 ALKBH4Q9NXW9 302 aa20.51■□□□□ 0.87
TRAF4-207ENST00000461195 NKX2-2O95096 273 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 KCNH1O95259 989 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 GRNP28799 593 aaKnown RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 MAP3K8P41279 467 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 NUP107P57740 925 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 CRYZQ08257 329 aaKnown RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 LSM12Q3MHD2 195 aaKnown RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 WIPI1Q5MNZ9 446 aaPredicted RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 C1orf185Q5T7R7 199 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 AGBL2Q5U5Z8 902 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 ATG16L1Q676U5 607 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 ZCCHC12Q6PEW1 402 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 B3GNT6Q6ZMB0 384 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 TRIM42Q8IWZ5 723 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 LRRC34Q8IZ02 419 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 RAB3IL1Q8TBN0 382 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 CA5BP1Q8WTZ4 195 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 NUDT8Q8WV74 236 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 ASB5Q8WWX0 329 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 SLC9A6Q92581 669 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 FAM120BQ96EK7 910 aaKnown RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 BHLHE41Q9C0J9 482 aaPredicted RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 MEAF6Q9HAF1 191 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 ZCCHC3Q9NUD5 404 aaKnown RBP20.5■□□□□ 0.87
TRAF4-207ENST00000461195 ABCG2Q9UNQ0 655 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 SLC6A5Q9Y345 797 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 FAM215AQ9Y5M1 114 aa20.5■□□□□ 0.87
TRAF4-207ENST00000461195 GXYLT2A0PJZ3 443 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 SNNO75324 88 aaPredicted RBP20.49■□□□□ 0.87
TRAF4-207ENST00000461195 RFX3P48380 749 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 GAS1P54826 345 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 NHSL2Q5HYW2 709 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 RTL6Q6ICC9 239 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 MFSD12Q6NUT3 480 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 CAMKMTQ7Z624 323 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 YRDCQ86U90 279 aaKnown RBP20.49■□□□□ 0.87
TRAF4-207ENST00000461195 PIK3R3Q92569 461 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 RMND5BQ96G75 393 aaPredicted RBP20.49■□□□□ 0.87
TRAF4-207ENST00000461195 TIMP4Q99727 224 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 TTYH2Q9BSA4 534 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 DUSP26Q9BV47 211 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 RNF6Q9Y252 685 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 SNX8Q9Y5X2 465 aa20.49■□□□□ 0.87
TRAF4-207ENST00000461195 CACNA1CQ13936 2221 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 SCO2O43819 266 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 FADS1O60427 444 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 GLI4P10075 376 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 ACP2P11117 423 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 LBPP18428 481 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 CHRNB4P30926 498 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PTGER4P35408 488 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 GCKP35557 465 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PRIM2P49643 509 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 CLK3P49761 638 aaKnown RBP20.48■□□□□ 0.87
TRAF4-207ENST00000461195 DIO3P55073 304 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PGS1Q32NB8 556 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 VASNQ6EMK4 673 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PM20D2Q8IYS1 436 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 ULK2Q8IYT8 1036 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 OR14L1PQ8NHC6 308 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PSMA8Q8TAA3 256 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 OR2B2Q9GZK3 357 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 MANSC1Q9H8J5 431 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 SDHAF3Q9NRP4 125 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 FAM120CQ9NX05 1096 aaKnown RBP20.48■□□□□ 0.87
TRAF4-207ENST00000461195 FLRT3Q9NZU0 649 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 PPP4R1LQ9P1A2 415 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 FBXL2Q9UKC9 423 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 ARHGAP21Q5T5U3 1957 aa20.48■□□□□ 0.87
TRAF4-207ENST00000461195 AHRRA9YTQ3 701 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 C6orf47O95873 294 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms