RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CAMKMTQ7Z624 323 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 DND1Q8IYX4 353 aaKnown RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 SLC15A4Q8N697 577 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 SLC22A8Q8TCC7 542 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 THAP3Q8WTV1 239 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 C12orf43Q96C57 262 aaKnown RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 OSBPL11Q9BXB4 747 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 MFRPQ9BY79 579 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.25□□□□□ -0.77
APTX-209ENST00000460940 GLIPR2Q9H4G4 154 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 WDR55Q9H6Y2 383 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 LIN28AQ9H9Z2 209 aaKnown RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 AIG1Q9NVV5 245 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 PLA2G3Q9NZ20 509 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 SH3BP4Q9P0V3 963 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ERVK-11Q9UQG0 969 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ERGIC3Q9Y282 383 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 PCDHGB6Q9Y5F9 930 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 NOX1Q9Y5S8 564 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 GOLGA8QA0A0J9YX86 632 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 GOLGA8OA6NCC3 632 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 GOLGA8NF8WBI6 632 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 PLOD2O00469 737 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 KPNA4O00629 521 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 SUV39H1O43463 412 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 OR2J2O76002 312 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 CBX7O95931 251 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 OC90Q02509 493 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 MLC1Q15049 377 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 OR1C1Q15619 314 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 DPY19L1Q2PZI1 675 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 SLC9B1Q4ZJI4 515 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ZNF385BQ569K4 471 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 HLA-DQA1Q5Y7H0 255 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ANKRD26P1Q6NSI1 321 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 FAM111BQ6SJ93 734 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 OPN5Q6U736 354 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 DEFB107AQ8IZN7 70 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 TMEM156Q8N614 296 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ZNF441Q8N8Z8 693 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 MDS2Q8NDY4 140 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 C16orf52Q8NHV5 167 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 ASB15Q8WXK1 588 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 TP53INP1Q96A56 240 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 TMIGD2Q96BF3 282 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 TESCQ96BS2 214 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 COQ8BQ96D53 544 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 RMND5BQ96G75 393 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 ZNF597Q96LX8 424 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 GAL3ST4Q96RP7 486 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 DPY30Q9C005 99 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 BHLHE41Q9C0J9 482 aaPredicted RBP10.25□□□□□ -0.77
APTX-209ENST00000460940 SLAMF7Q9NQ25 335 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 AP4S1Q9Y587 144 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 PCDHGA10Q9Y5H3 936 aa10.25□□□□□ -0.77
APTX-209ENST00000460940 A0A087WXM4 84 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 C2orf92A0A1B0GVN3 265 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 WWP2O00308 870 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 ALOX5P09917 674 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 ALDOCP09972 364 aaKnown RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 CD46P15529 392 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 GPX3P22352 226 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 DCKP27707 260 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 SOX18P35713 384 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 CD96P40200 585 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 DCAF7P61962 342 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 TRMT12Q53H54 448 aaKnown RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 PIGGQ5H8A4 983 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 FHL5Q5TD97 284 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 NXNQ6DKJ4 435 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 RPUSD3Q6P087 351 aaKnown RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 TAGAPQ8N103 731 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 OR2L13Q8N349 312 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 KRTCAP2Q8N6L1 136 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 Q8NA96 180 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 OR7A2PQ8NGA2 310 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 OR52R1Q8NGF1 315 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 DOK4Q8TEW6 326 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 KAT2AQ92830 837 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 CIDECQ96AQ7 238 aaPredicted RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 CCDC124Q96CT7 223 aaKnown RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 C5orf34Q96MH7 638 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 OSBPL10Q9BXB5 764 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 NDEL1Q9GZM8 345 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 NEUROD4Q9HD90 331 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 LRFN1Q9P244 771 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 C19orf53Q9UNZ5 99 aaPredicted RBP10.24□□□□□ -0.77
APTX-209ENST00000460940 CSAG2Q9Y5P2 127 aa10.24□□□□□ -0.77
APTX-209ENST00000460940 TRIM64A6NGJ6 449 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 A8MVJ9 347 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 ANKRD28O15084 1053 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 ACOX3O15254 700 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 MTRF1O75570 445 aaKnown RBP10.23□□□□□ -0.77
APTX-209ENST00000460940 NEURL1O76050 574 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 LAMP1P11279 417 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 PTGER1P34995 402 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 MC3RP41968 323 aa10.23□□□□□ -0.77
APTX-209ENST00000460940 MANFP55145 182 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms