RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TIMM29Q9BSF4 260 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 C8orf33Q9H7E9 229 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ACTR10Q9NZ32 417 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 I3L521 148 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 NDUFB2O95178 105 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 IGLV3-27P01718 113 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 GRPRP30550 384 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ALDH3B2P48448 385 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 GBX1Q14549 363 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 DLEU7Q6UYE1 221 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF761Q86XN6 746 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 SYT14Q8NB59 555 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 OR5T3Q8NGG3 340 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 SFXN5Q8TD22 340 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 TREX2Q9BQ50 279 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ALG8Q9BVK2 526 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ACTR6Q9GZN1 396 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ASIC5Q9NY37 505 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 MYO10Q9HD67 2058 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ITGA5P08648 1049 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF619Q8N2I2 560 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 CYB561A3Q8NBI2 242 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 OR5K2Q8NHB8 316 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 THAP6Q8TBB0 222 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 NUP205Q92621 2012 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF878C9JN71 531 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 SLCO2B1O94956 709 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 SBK3P0C264 359 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ZDHHC11BP0C7U3 371 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ADH7P40394 386 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 P2RY2P41231 377 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 GRM7Q14831 915 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 TTLL10Q6ZVT0 673 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 MEX3DQ86XN8 651 aaKnown RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 OR2T4Q8NH00 348 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 CACNG6Q9BXT2 260 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ADAM29Q9UKF5 820 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 FARSAQ9Y285 508 aaKnown RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 HEMK1Q9Y5R4 338 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 PRAMEF2O60811 474 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 PPP1R3DO95685 299 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 CSTBP04080 98 aaKnown RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 CAPNS1P04632 268 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 GPX2P18283 190 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 CHMP24386 653 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 MMP12P39900 470 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 MAGEA8P43361 318 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 GIPRP48546 466 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 E2F1Q01094 437 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 MRPL58Q14197 206 aaKnown RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 TMEM41AQ96HV5 264 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 SLC6A15Q9H2J7 730 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 FOLH1BQ9HBA9 442 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 LOC100509620A0A075B734 347 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 FBLP22087 321 aaKnown RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 RORAP35398 523 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 ARPC4P59998 168 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 HOXC5Q00444 222 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 ABCA11PQ4W5N1 156 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 TCEAL6Q6IPX3 200 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 DNAJC22Q8N4W6 341 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 SETD6Q8TBK2 473 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 DISC1C4P0D8 188 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 SLC16A6O15403 523 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 FURINP09958 794 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 H2AFB2P0C5Z0 115 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 CLDN2P57739 230 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 OR8S1Q8NH09 359 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 NECTIN4Q96NY8 510 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 THSD1Q9NS62 852 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 URB1O60287 2271 aaKnown RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 TARM1B6A8C7 271 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 POLR1CO15160 346 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 MAGEA2P43356 314 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 PFN3P60673 137 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 TCTE1Q5JU00 501 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 VWA5B2Q8N398 1253 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF740Q8NDX6 193 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 OR51L1Q8NGJ5 315 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 RPL3LQ92901 407 aaKnown RBP13.92□□□□□ -0.18
PTPRU-205ENST00000460170 HOXD1Q9GZZ0 328 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 SH2B3Q9UQQ2 575 aa13.92□□□□□ -0.18
PTPRU-205ENST00000460170 UCHL1P09936 223 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 GNG2P59768 71 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 ERVFC1P60507 584 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF91Q05481 1191 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 RHOXF1Q8NHV9 184 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 ADAMTS16Q8TE57 1224 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 ZDHHC1Q8WTX9 485 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 CDS1Q92903 461 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
PTPRU-205ENST00000460170 RANBP3Q9H6Z4 567 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-205ENST00000460170 DHDHQ9UQ10 334 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms