RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SLITRK5O94991 958 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 TNFSF15O95150 251 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 CLPTM1O96005 669 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 NQO1P15559 274 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 CSNK2A2P19784 350 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 FRKP42685 505 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 RASSF2P50749 326 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 DCDP81605 110 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 EXOSC7Q15024 291 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 ZNF674Q2M3X9 581 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 ERICH5Q6P6B1 374 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 LANCL3Q6ZV70 420 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 OLIG3Q7RTU3 272 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 ULK2Q8IYT8 1036 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 OR7G2Q8NG99 324 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 OR10A6Q8NH74 314 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 ROPN1LQ96C74 230 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 LIN37Q96GY3 246 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 TREX2Q9BQ50 279 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 CPPED1Q9BRF8 314 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 SLC35A5Q9BS91 424 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 VN1R1Q9GZP7 353 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 TPT1P8Q9HAU6 139 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 GID8Q9NWU2 228 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 TMEM181Q9P2C4 612 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 PKD1L2Q7Z442 2459 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 KNTC1P50748 2209 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 CCDC187A0A096LP49 1063 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 CLIC1O00299 241 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 TBX19O60806 448 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 ERN1O75460 977 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 ZGLP1P0C6A0 271 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 PCSK2P16519 638 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 NT5EP21589 574 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 NTSP30990 170 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 RPL3P39023 403 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 OR4D2P58180 307 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 HTD2P86397 168 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 MS4A2Q01362 244 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 RHAGQ02094 409 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 STX4Q12846 297 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 TP53BP2Q13625 1128 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 SF3B4Q15427 424 aaKnown RBP eCLIP9.62□□□□□ -0.873e-14■■■■■ 33.9
USP39-210ENST00000459775 SPDYE7PQ495Y7 208 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 PIGGQ5H8A4 983 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 PRMT9Q6P2P2 845 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 C16orf89Q6UX73 402 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 HACD2Q6Y1H2 254 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 RNF130Q86XS8 419 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 LRRC25Q8N386 305 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 ZNF321PQ8N8H1 164 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 OR5P2Q8WZ92 322 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 TANKQ92844 425 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 MAL2Q969L2 176 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 FAM120BQ96EK7 910 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 MVB12AQ96EY5 273 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 ZBED6CLQ96FA7 236 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 SPAG4Q9NPE6 437 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 EQTNQ9NQ60 294 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 ZNF282Q9UDV7 671 aaPredicted RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 PCDHGB4Q9UN71 923 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 CDC14AQ9UNH5 594 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 GAB2Q9UQC2 676 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 CACNG2Q9Y698 323 aa9.62□□□□□ -0.87
USP39-210ENST00000459775 A0A087WV48 116 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 RNF103-CHMP3A0A140T963 221 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CTNSO60931 367 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 IFNA16P05015 189 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 ETFAP13804 333 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 NCK1P16333 377 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 MPIP34949 423 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 GSTM5P46439 218 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CCT3P49368 545 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 PGDP52209 483 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 MVDP53602 400 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 RPS18P62269 152 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 SKP1P63208 163 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 LIPEQ05469 1076 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 LGALS3BPQ08380 585 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 C17orf67Q0P5P2 114 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 MGAT2Q10469 447 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 NKG7Q16617 165 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 SWI5Q1ZZU3 235 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 C1orf185Q5T7R7 199 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 RFPL4BQ6ZWI9 263 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 GALNT10Q86SR1 603 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 C10orf53Q8N6V4 93 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 ZFP90Q8TF47 636 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 RAB8BQ92930 207 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 C8orf44Q96CB5 159 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 ELP4Q96EB1 424 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 SGCZQ96LD1 299 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms