RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ULBP1Q9BZM6 244 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RDH14Q9HBH5 336 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MYOTQ9UBF9 498 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 STRAPQ9Y3F4 350 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PCDHGA5Q9Y5G8 931 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PLXNB3Q9ULL4 1909 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PCDH17O14917 1159 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DDCP20711 480 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MPSTP25325 297 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TIA1P31483 386 aaKnown RBP eCLIP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CEBPAP49715 358 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RIDAP52758 137 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CDCA2Q69YH5 1023 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 IL34Q6ZMJ4 242 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 P4HA3Q7Z4N8 544 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DCUN1D4Q92564 292 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC35D1Q9NTN3 355 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC2A6Q9UGQ3 507 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC23A1Q9UHI7 598 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MAFBQ9Y5Q3 323 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 XIRP1Q702N8 1843 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 EML6Q6ZMW3 1958 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TBC1D3BA6NDS4 549 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 A6NLC8 198 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ANKRD66B4E2M5 251 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 UMAD1C9J7I0 102 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR7A17O14581 309 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DPM1O60762 260 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ALDOBP05062 364 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR8U9P0C7N5 309 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ITPKBP27987 946 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DLK1P80370 383 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SIM2Q14190 667 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PLA1AQ53H76 456 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR56B1Q8NGI3 324 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ABCG4Q9H172 646 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TESQ9UGI8 421 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SCML2Q9UQR0 700 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CACNG2Q9Y698 323 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TBC1D3KA0A087X1G2 549 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 TBC1D3FA6NER0 549 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 POP7O75817 140 aaKnown RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 RAB3DO95716 219 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ADRB3P13945 408 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 HTR2CP28335 458 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 KIAA1024LP59773 190 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF616Q08AN1 781 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 BNIP3Q12983 259 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 TBC1D3GQ6DHY5 549 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 SLC30A6Q6NXT4 461 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 LEG1Q6P5S2 330 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 WDR5BQ86VZ2 330 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM173Q86WV6 379 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF485Q8NCK3 441 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ZMIZ2Q8NF64 920 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 SHDQ96IW2 340 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 SORCS2Q96PQ0 1159 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 SIX2Q9NPC8 291 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 DMAC2Q9NW81 257 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 DLGAP4Q9Y2H0 992 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 MAP4K5Q9Y4K4 846 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 HELZP42694 1942 aaKnown RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 hCG_1809904A0A1W2PP81 198 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 A0A1W2PPE2 198 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 A0A1W2PR64 198 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 A0A1W2PRV1 198 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 SNRPGP15A8MWD9 76 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF878C9JN71 531 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 CDRT1O95170 752 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 JUNBP17275 347 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 FBLN1P23142 703 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 RNF144AP50876 292 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 ECH1Q13011 328 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 TCTE1Q5JU00 501 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 PRSS58Q8IYP2 241 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 OR5D14Q8NGL3 314 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 BRIX1Q8TDN6 353 aaKnown RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 EMID1Q96A84 441 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 NELL2Q99435 816 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 KCNG2Q9UJ96 466 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 MRPS23Q9Y3D9 190 aaKnown RBP4.96□□□□□ -1.61
CSMD3-204ENST00000455883 CLCA3PQ9Y6N3 262 aa4.96□□□□□ -1.61
CSMD3-204ENST00000455883 NPEPPSL1A6NEC2 478 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 EIF4E1BA6NMX2 242 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SYT5O00445 386 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ABCD4O14678 606 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 FFAR3O14843 346 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GPR42O15529 346 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ONECUT3O60422 494 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 AMY2BP19961 511 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC6A9P48067 706 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 USP50Q70EL3 339 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC9B2Q86UD5 537 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GPR156Q8NFN8 814 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TANKQ92844 425 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NECTIN4Q96NY8 510 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 FDXACB1Q9BRP7 624 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms