RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 IRF4Q15306 451 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SYNPOQ8N3V7 929 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 ANKRD53Q8N9V6 530 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 OR56A3Q8NH54 315 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 OR52P1PQ8NH57 321 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 RHOXF1Q8NHV9 184 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 WFDC6Q9BQY6 131 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 TNFRSF10DQ9UBN6 386 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 NDRG4Q9ULP0 352 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 CHURC1-FNTBB4DL54 471 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SSNA1O43805 119 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PRKYO43930 277 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SLC2A2P11168 524 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 GJA4P35212 333 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SHC2P98077 582 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 IFITM2Q01629 132 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 GRSF1Q12849 480 aaKnown RBP eCLIP10.51□□□□□ -0.731e-5■□□□□ 8.9
DDR1-240ENST00000454612 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PAMR1Q6UXH9 720 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SYT9Q86SS6 491 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 UFD1Q92890 307 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 HRASLS5Q96KN8 279 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 GPR174Q9BXC1 333 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 C6orf106Q9H6K1 298 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 SMURF1Q9HCE7 757 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 NEUROD4Q9HD90 331 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 HCN3Q9P1Z3 774 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 MAN2B2Q9Y2E5 1009 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 CNOT1A5YKK6 2376 aaKnown RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TRIM64A6NGJ6 449 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TRIM64BA6NI03 449 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 RNGTTO60942 597 aaKnown RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 CPNE6O95741 557 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ZNF888P0CJ79 500 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 PRKCAP17252 672 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 AHCYP23526 432 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 RPS19P39019 145 aaKnown RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 SOX2P48431 317 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SMSP52788 366 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 P2RX3P56373 397 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TAS2R38P59533 333 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 CDKN3Q16667 212 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ATAD3CQ5T2N8 411 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 PLAG1Q6DJT9 500 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 SLC27A4Q6P1M0 643 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ZNF547Q8IVP9 402 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 CDS1Q92903 461 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 NELL2Q99435 816 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TTYH1Q9H313 450 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PRSS16Q9NQE7 514 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PLSCR3Q9NRY6 295 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ZNF226Q9NYT6 803 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PCDHGA2Q9Y5H1 932 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 AGAP5A6NIR3 686 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 H3BQ06 376 aaPredicted RBP10.51□□□□□ -0.73
DDR1-240ENST00000454612 OSMP13725 252 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PYCR1P32322 319 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ILF3Q12906 894 aaKnown RBP eCLIP10.51□□□□□ -0.73
DDR1-240ENST00000454612 AGAP6Q5VW22 663 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 OR5T3Q8NGG3 340 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 UBTD2Q8WUN7 234 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 RSPRY1Q96DX4 576 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 AGAP4Q96P64 663 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 PSD2Q9BQI7 771 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TPSD1Q9BZJ3 242 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 TMEM168Q9H0V1 697 aa10.51□□□□□ -0.73
DDR1-240ENST00000454612 EP300Q09472 2414 aaPredicted RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 TDRD6O60522 2096 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 SDC3O75056 442 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 GABARAPO95166 117 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 ITGAMP11215 1152 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 TGM1P22735 817 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 EVI2BP34910 448 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 GIPRP48546 466 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 RAB28P51157 221 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 PRPF38BQ5VTL8 546 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 ARSKQ6UWY0 536 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 OR8J1Q8NGP2 316 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 OR2L2Q8NH16 312 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 NEIL3Q8TAT5 605 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 THAP3Q8WTV1 239 aaPredicted RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 C7orf34Q96L11 122 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 PPIL3Q9H2H8 161 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 C1GALT1Q9NS00 363 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 KCNN3Q9UGI6 736 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 MAU2Q9Y6X3 613 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 TRAV27A0A087WT01 109 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 KCNE1BA0A087WTH5 132 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 A0A1B0GW55 424 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms