RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PLGLB1Q02325 96 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 AGKQ53H12 422 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 SLC30A6Q6NXT4 461 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 BNC2Q6ZN30 1099 aaPredicted RBP25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 ZNF621Q6ZSS3 439 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 TRIML2Q8N7C3 387 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 COX18Q8N8Q8 333 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 MIPOL1Q8TD10 442 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 CDS1Q92903 461 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 NEURL3Q96EH8 262 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 ITCHQ96J02 903 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 SLC35G5Q96KT7 338 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 OR7D2Q96RA2 312 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 BTBD2Q9BX70 525 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 ZFP64Q9NPA5 681 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 BOKQ9UMX3 212 aaPredicted RBP25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 PRAMEF25A6NGN4 478 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 NPIPA5E9PKD4 350 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 HS6ST1O60243 411 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 ICOSLGO75144 302 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 ZCCHC18P0CG32 403 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 CD1EP15812 388 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 PPIAP62937 165 aaKnown RBP25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 KRTCAP3Q53RY4 240 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 SLC22A16Q86VW1 577 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 GTF2H4Q92759 462 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 SPDL1Q96EA4 605 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 TMEM41AQ96HV5 264 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 GPR137Q96N19 417 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 PHF12Q96QT6 1004 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 TSPAN10Q9H1Z9 355 aaPredicted RBP25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 SLC6A13Q9NSD5 602 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 NPIPA1Q9UND3 350 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 KCNE3Q9Y6H6 103 aa25.62■■□□□ 1.69
SMARCC1-203ENST00000454240 LRRC3CA6NJW4 275 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 TFECO14948 347 aaPredicted RBP25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 C1QCP02747 245 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 GSNP06396 782 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 LSP1P33241 339 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 TRPC1P48995 793 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 RPS26P62854 115 aaKnown RBP25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 POU6F2P78424 691 aaPredicted RBP25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 FNDC7Q5VTL7 733 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 FIGNL1Q6PIW4 674 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 PACS2Q86VP3 889 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 TMEM251Q8N6I4 163 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 OR5D16Q8NGK9 328 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 C10orf82Q8WW14 230 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 OSBPL11Q9BXB4 747 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 ZDHHC11Q9H8X9 412 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 KLRF1Q9NZS2 232 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 PCDHGB3Q9Y5G1 929 aa25.61■■□□□ 1.69
SMARCC1-203ENST00000454240 ANKUB1A6NFN9 424 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 DUXAA6NLW8 204 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 FAM166BA8MTA8 275 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 ACOT7O00154 380 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 NR5A2O00482 541 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 ASNA1O43681 348 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 WISP1O95388 367 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 CAPN3P20807 821 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 GNLYP22749 145 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 PTPN6P29350 595 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 CHI3L1P36222 383 aaPredicted RBP25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 RFX3P48380 749 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 SEC24CP53992 1094 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 MRPL49Q13405 166 aaKnown RBP25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 CMPK2Q5EBM0 449 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 SLC2A7Q6PXP3 512 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 OR52N2Q8NGI0 321 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 ZNF597Q96LX8 424 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 GALNT9Q9HCQ5 603 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 FBXO34Q9NWN3 711 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 FAM53CQ9NYF3 392 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 FLRT3Q9NZU0 649 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 SEC14L3Q9UDX4 400 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 RELNP78509 3460 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 FREM3P0C091 2139 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 ESPL1Q14674 2120 aa25.6■■□□□ 1.69
SMARCC1-203ENST00000454240 ADAM10O14672 748 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 FADS1O60427 444 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 UTS2O95399 124 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 RFPL3SP0C7P2 107 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 LCN1P31025 176 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 EVI2BP34910 448 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 UQCRFS1P47985 274 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 GAS1P54826 345 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 ZFP90Q8TF47 636 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 JSRP1Q96MG2 331 aaPredicted RBP25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 G6PC3Q9BUM1 346 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 OR51I1Q9H343 314 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 ABCG2Q9UNQ0 655 aa25.59■■□□□ 1.69
SMARCC1-203ENST00000454240 RP1L1Q8IWN7 2480 aaPredicted RBP25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 C2orf72A6NCS6 295 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 CASP9P55211 416 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 CCNJQ5T5M9 372 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 TIGD3Q6B0B8 471 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 ZAR1Q86SH2 424 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 GALNT10Q86SR1 603 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 FAM109AQ8N4B1 249 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms