RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SIAH3Q8IW03 269 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 RAB42Q8N4Z0 105 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF527Q8NB42 609 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 PDXPQ96GD0 296 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 C16orf58Q96GQ5 468 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 NDC1Q9BTX1 674 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 KRCC1Q9NPI7 259 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 NUP50Q9UKX7 468 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 IRAK3Q9Y616 596 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 U3KQ87 197 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 PCDH8O95206 1070 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 VNN2O95498 520 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ACP5P13686 325 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 CXCL3P19876 107 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 TRIM23P36406 574 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 NUP62P37198 522 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 PER3P56645 1201 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF628Q5EBL2 1059 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 FAM46CQ5VWP2 391 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ALKAL2Q6UX46 152 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 CFAP77Q6ZQR2 320 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 GPR155Q7Z3F1 870 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 A0A087WUU8 490 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 RAF1P04049 648 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 HOXB9P17482 250 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ITGB7P26010 798 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 BLVRAP53004 296 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 FAM98AQ8NCA5 519 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
UBE2D3-210ENST00000453744 TSC2P49815 1807 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 C1orf105O95561 183 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 EIF4EP06730 217 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 GNA13Q14344 377 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 RPTNQ6XPR3 784 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC9B2Q86UD5 537 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 OR2T33Q8NG76 320 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 ISG20L2Q9H9L3 353 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 PPM1DO15297 605 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 CCL16O15467 120 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 CHP2O43745 196 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 DPM1O60762 260 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 FMO6PO60774 539 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 FZD7O75084 574 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 LIMS3P0CW19 117 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 LIMS4P0CW20 117 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 POLR2CP19387 275 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 F8A1P23610 371 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 HMGA2P52926 109 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 TPBGQ13641 420 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 CAMK1Q14012 370 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 NDUFAF6Q330K2 333 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF782Q6ZMW2 699 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 GRHL3Q8TE85 626 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 OSTF1Q92882 214 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 RGMAQ96B86 450 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 MARK1Q9P0L2 795 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC9B1P1A6NJY1 282 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 HYAL3O43820 417 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 HMGN1P05114 100 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 SELPP16109 830 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 KHDRBS2Q5VWX1 349 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 ADGRF3Q8IZF5 1079 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 BCL7CQ8WUZ0 217 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 RELTQ969Z4 430 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 DDOQ99489 341 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 KLHL42Q9P2K6 505 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
UBE2D3-210ENST00000453744 PSMD9O00233 223 aa13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 HMGN4O00479 90 aa13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 MAGEB4O15481 346 aaPredicted RBP13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 ARPC5O15511 151 aa13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 LATO43561 262 aa13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 SOD1P00441 154 aa13.02□□□□□ -0.32
UBE2D3-210ENST00000453744 LAMP2P13473 410 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms