RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PIGNO95427 931 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 KLF8O95600 359 aaPredicted RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ALDH4A1P30038 563 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 PKLRP30613 574 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 RDXP35241 583 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CETN2P41208 172 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 DHPSP49366 369 aaPredicted RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 MTTPP55157 894 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SLC7A9P82251 487 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 RPL36AP83881 106 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 KDSRQ06136 332 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CYP24A1Q07973 514 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 RBM39Q14498 530 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 KIR2DS3Q14952 304 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TRADDQ15628 312 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 KNOP1Q1ED39 458 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SLC25A53Q5H9E4 307 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SIRPB2Q5JXA9 342 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SLC35D3Q5M8T2 416 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TEX35Q5T0J7 233 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 OR4C11Q6IEV9 310 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SPSB3Q6PJ21 355 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 AFTPHQ6ULP2 937 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SCARA5Q6ZMJ2 495 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 LPCAT2Q7L5N7 544 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CPEB2Q7Z5Q1 589 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ZER1Q7Z7L7 766 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CUZD1Q86UP6 607 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ZC3H3Q8IXZ2 948 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 PRSS35Q8N3Z0 413 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF843Q8N446 348 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SIDT2Q8NBJ9 832 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 LINC00301Q8NCQ3 95 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 OR4C15Q8NGM1 316 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 OR52N5Q8NH56 324 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SCFD1Q8WVM8 642 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 RAB7BQ96AH8 199 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 C14orf79Q96F83 325 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 NSL1Q96IY1 281 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ADGRG7Q96K78 797 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CNOT6LQ96LI5 555 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TAAR6Q96RI8 345 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 C1QTNF4Q9BXJ3 329 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 NUSAP1Q9BXS6 441 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 FGFBP2Q9BYJ0 223 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 DPEP2Q9H4A9 486 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 FBXO44Q9H4M3 255 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 ZDHHC6Q9H6R6 413 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CHST11Q9NPF2 352 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 DMAP1Q9NPF5 467 aaPredicted RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TMEM9BQ9NQ34 198 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 FGF21Q9NSA1 209 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 EXOC1Q9NV70 894 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 OR6C2Q9NZP2 312 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 SLC12A6Q9UHW9 1150 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 LSM7Q9UK45 103 aaKnown RBP3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CFAP45Q9UL16 551 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 MMP17Q9ULZ9 603 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 CPQQ9Y646 472 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 PTPRJQ12913 1337 aa3.86□□□□□ -1.79
LINC00393-202ENST00000452852 TP53BP1Q12888 1972 aaPredicted RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 A0A1B0GUV1 79 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 PVALEFA0A1B0GWK0 134 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 BCLAF3A2AJT9 711 aaKnown RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 TMEM89A2RUT3 159 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 F8WDY8 70 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 K7EQS6 105 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 CLDN5O00501 218 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 COCHO43405 550 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 CALUO43852 315 aaPredicted RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 XPNPEP2O43895 674 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 GRAP2O75791 330 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 OAS1P00973 400 aaKnown RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 RAF1P04049 648 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 PROS1P07225 676 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 TPBGLP0DKB5 382 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 KRT13P13646 458 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 OPRD1P41143 372 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 TNFRSF4P43489 277 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 CASP4P49662 377 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 HNMTP50135 292 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 TNFSF10P50591 281 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 NOVA1P51513 510 aaKnown RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 GAS1P54826 345 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 MAZP56270 477 aaKnown RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 CLDN17P56750 224 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 MAP3K7CLP57077 242 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 SLC8A3P57103 927 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 MYL6P60660 151 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 HERV-K104P63124 156 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 RPP38P78345 283 aaKnown RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 GABPB1Q06547 395 aaPredicted RBP3.85□□□□□ -1.79
LINC00393-202ENST00000452852 SCGB2A2Q13296 93 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 STX1AQ16623 288 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 SGSM1Q2NKQ1 1148 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 KIF19Q2TAC6 998 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 CMPK2Q5EBM0 449 aa3.85□□□□□ -1.79
LINC00393-202ENST00000452852 N4BP2L1Q5TBK1 243 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms